RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 NKAIN1Q4KMZ8 207 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 BCL7AQ4VC05 210 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 MRPL14Q6P1L8 145 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 AMIGO1Q86WK6 493 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 ADGRF3Q8IZF5 1079 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 C19orf47Q8N9M1 422 aaKnown RBP19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 MRGPRX2Q96LB1 330 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 LINC00615Q96LM1 132 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 CCM2Q9BSQ5 444 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 AP1M1Q9BXS5 423 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 ASB8Q9H765 288 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 HACD3Q9P035 362 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 FBXL4Q9UKA2 621 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 AP1M2Q9Y6Q5 423 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 SETD2Q9BYW2 2564 aaPredicted RBP19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 C3orf70A6NLC5 250 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 STX7O15400 261 aaKnown RBP19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 SLC1A5Q15758 541 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 AGAP7PQ5VUJ5 663 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 PRAMEF13Q5VWM6 474 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 RFX6Q8HWS3 928 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 PARP9Q8IXQ6 854 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 IPMKQ8NFU5 416 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 HM13Q8TCT9 377 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 OXNAD1Q96HP4 312 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 LURAP1Q96LR2 239 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 AGAP4Q96P64 663 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 HGH1Q9BTY7 390 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 TFB2MQ9H5Q4 396 aaKnown RBP19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 TXLNGQ9NUQ3 528 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 IRAK4Q9NWZ3 460 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 SAE1Q9UBE0 346 aaPredicted RBP19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 ARL5AQ9Y689 179 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 BZW2Q9Y6E2 419 aaKnown RBP19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 ZFHX3Q15911 3703 aa19.61■□□□□ 0.73
SQSTM1-215ENST00000514093 JRKO75564 520 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 EPOP01588 193 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 SERPING1P05155 500 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 CD63P08962 238 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 PDHA2P29803 388 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 TNNT3P45378 269 aaPredicted RBP19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 GABRA4P48169 554 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 KCNK10P57789 538 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 TMPRSS15P98073 1019 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 WASHC5Q12768 1159 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 SPESP1Q6UW49 350 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 IGFL2Q6UWQ7 119 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 HOOK3Q86VS8 718 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 CATSPER1Q8NEC5 780 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 PROKR1Q8TCW9 393 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 SLX1AQ9BQ83 275 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 SLC22A11Q9NSA0 550 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 FKBPLQ9UIM3 349 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 HIVEP1P15822 2718 aa19.6■□□□□ 0.73
SQSTM1-215ENST00000514093 DOCK10Q96BY6 2186 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 A0A1B0GTH6 734 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 KLHL33A6NCF5 533 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 ZSCAN9O15535 394 aaPredicted RBP19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 SRP72O76094 671 aaKnown RBP19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 PYGMP11217 842 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 ART3Q13508 389 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 MESDQ14696 234 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 FAM180AQ6UWF9 173 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 GDF7Q7Z4P5 450 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 OR4K2Q8NGD2 314 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 RNF25Q96BH1 459 aaPredicted RBP19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 DCUN1D1Q96GG9 259 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 PACSIN1Q9BY11 444 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 OR52A5Q9H2C5 316 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 FAM96AQ9H5X1 160 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 OLAHQ9NV23 265 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 CDC23Q9UJX2 597 aa19.59■□□□□ 0.73
SQSTM1-215ENST00000514093 IFRD1O00458 451 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 UGT2B7P16662 529 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 ALAS2P22557 587 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 PRKD1Q15139 912 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 TLR1Q15399 786 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 IRAK1BP1Q5VVH5 260 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 SARM1Q6SZW1 724 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 LINC00696Q6ZRV3 163 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 SHISA6Q6ZSJ9 500 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 CPLX3Q8WVH0 158 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 ITLN2Q8WWU7 325 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 RELTQ969Z4 430 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 COG4Q9H9E3 785 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 SPHK1Q9NYA1 384 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 KLHL8Q9P2G9 620 aaPredicted RBP19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 UVRAGQ9P2Y5 699 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 ICKQ9UPZ9 632 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 MYO7BQ6PIF6 2116 aa19.58■□□□□ 0.72
SQSTM1-215ENST00000514093 CNTRLQ7Z7A1 2325 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 ANKRD12Q6UB98 2062 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 SOCS6O14544 535 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 AGTP01019 485 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 KRT1P04264 644 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 ZFXP17010 805 aaPredicted RBP19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 MMP11P24347 488 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 PRLHRP49683 370 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 NR1I3Q14994 352 aa19.57■□□□□ 0.72
SQSTM1-215ENST00000514093 B3GNTL1Q67FW5 361 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms