RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 EIF3CLB5ME19 914 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 MTSS1O43312 755 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ULK1O75385 1050 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 STK17BO94768 372 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ATP1A1P05023 1023 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 CYP2A6P11509 494 aaPredicted RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 GP1BBP13224 206 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 MAPK9P45984 424 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 PPM1FP49593 454 aaPredicted RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 RENBPP51606 427 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 NEK2P51955 445 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 SCAND1P57086 179 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 PHC1P78364 1004 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 MC2RQ01718 297 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 OCRLQ01968 901 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 UBXN1Q04323 297 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 PCBP2Q15366 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
COPS4-209ENST00000511653 USP45Q70EL2 814 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 GALNT13Q8IUC8 556 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.55□□□□□ -1.36
COPS4-209ENST00000511653 NLGN4YQ8NFZ3 816 aaPredicted RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 ASB15Q8WXK1 588 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 STARD8Q92502 1023 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 COX14Q96I36 57 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 CATSPER2Q96P56 530 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ERGIC2Q96RQ1 377 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 EIF3CQ99613 913 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 SLC38A3Q99624 504 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 PARVAQ9NVD7 372 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 SIDT1Q9NXL6 827 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 TBC1D29Q9UFV1 150 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ANAPC2Q9UJX6 822 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 KCNK6Q9Y257 313 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TP53TG5Q9Y2B4 290 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 C2CD3Q4AC94 2353 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 PIKFYVEQ9Y2I7 2098 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 A0A0J9YYE9 177 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 A0A1W2PQ67 120 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ZW10O43264 779 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TRBC1P01850 177 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TPM2P07951 284 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ACP5P13686 325 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 FERP16591 822 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 FAHP16930 419 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ZNF28P17035 718 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 SDHAP31040 664 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 HSPA9P38646 679 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 MMP13P45452 471 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 HCAR3P49019 387 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 STC1P52823 247 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 GFERP55789 205 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 SESN3P58005 492 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 HHEXQ03014 270 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 DPYSL2Q16555 572 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 FAM182AQ5T1J6 154 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ARMC12Q5T9G4 340 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TMCO3Q6UWJ1 677 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 CEACAM20Q6UY09 585 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 POLNQ7Z5Q5 900 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TMEM135Q86UB9 458 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ATPAF2Q8N5M1 289 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ZNF610Q8N9Z0 462 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 OR10G6Q8NH81 332 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 NCSTNQ92542 709 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 HSPH1Q92598 858 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 KIAA1143Q96AT1 154 aaPredicted RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 MIB2Q96AX9 1013 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TSPAN17Q96FV3 270 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 CSPG4P5Q96PW8 444 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TEFMQ96QE5 360 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 WDR24Q96S15 920 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 DPYSL5Q9BPU6 564 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 RIOK2Q9BVS4 552 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 TBC1D10AQ9BXI6 508 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 SARS2Q9NP81 518 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 NT5MQ9NPB1 228 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.55□□□□□ -1.36
COPS4-209ENST00000511653 KCTD5Q9NXV2 234 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 CNOT8Q9UFF9 292 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 CNOT6Q9ULM6 557 aaKnown RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 PPIL1Q9Y3C6 166 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 TMEM184BQ9Y519 407 aaPredicted RBP6.55□□□□□ -1.36
COPS4-209ENST00000511653 ADGRG4Q8IZF6 3080 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
COPS4-209ENST00000511653 SNRNP200O75643 2136 aaKnown RBP6.54□□□□□ -1.36
COPS4-209ENST00000511653 MN1Q10571 1320 aaPredicted RBP6.54□□□□□ -1.36
COPS4-209ENST00000511653 ZNF503-AS2A6NEH8 195 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 LRRC53A6NM62 1247 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
COPS4-209ENST00000511653 AKAP10O43572 662 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 MFSD11O43934 449 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 SNX2O60749 519 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 RNF8O76064 485 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 MYBL2P10244 700 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 ATP1A3P13637 1013 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 DESP17661 470 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 MC3RP41968 323 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 UQCRFS1P47985 274 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 MLLT10P55197 1068 aa6.54□□□□□ -1.36
COPS4-209ENST00000511653 ABHD18Q0P651 414 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms