RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CAMKVQ8NCB2 501 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 SLC24A4Q8NFF2 622 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 RNF128Q8TEB7 428 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF473Q8WTR7 871 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 ATL1Q8WXF7 558 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 SYN2Q92777 582 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 SIPA1Q96FS4 1042 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 ST6GAL2Q96JF0 529 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF354BQ96LW1 612 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 CFAP57Q96MR6 1250 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 C17orf77Q96MU5 243 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF558Q96NG5 402 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 GBP5Q96PP8 586 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 PKP4Q99569 1192 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 PSD2Q9BQI7 771 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 FAM129AQ9BZQ8 928 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZCCHC17Q9NP64 241 aaKnown RBP3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 TCF7L2Q9NQB0 619 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 FAM118AQ9NWS6 357 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 RNF150Q9ULK6 438 aa3.21□□□□□ -1.9
TRAPPC11-207ENST00000511409 TRIM77I1YAP6 450 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 FGF17O60258 216 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 TBCAO75347 108 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 HSPA4LO95757 839 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 OR52Z1P0C646 297 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 DANCRP0C864 163 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 HOXB6P17509 224 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 GNAZP19086 355 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 MSH3P20585 1137 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ACHEP22303 614 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 EEF1B2P24534 225 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 AZGP1P25311 298 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 PTPN3P26045 913 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 HSPA4P34932 840 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 CCR10P46092 362 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF41P51814 821 aaPredicted RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 THOP1P52888 689 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 PDX1P52945 283 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 HNRNPKP61978 463 aaKnown RBP eCLIP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 CX3CL1P78423 397 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 RBPJQ06330 500 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ARMC3Q5W041 872 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 CORO6Q6QEF8 472 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 SLC26A9Q7LBE3 791 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 DGLUCYQ7Z3D6 616 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 SLFN11Q7Z7L1 901 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 NFE4Q86UQ8 179 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 VSIG1Q86XK7 387 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ARHGAP24Q8N264 748 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 CPSF7Q8N684 471 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 Q8NFD4 153 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 KIF18AQ8NI77 898 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 NSL1Q96IY1 281 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 SPATA17Q96L03 361 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 FER1L6-AS2Q96M78 137 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 MYADMQ96S97 322 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 TRMT61BQ9BVS5 477 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 TFB2MQ9H5Q4 396 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 BICC1Q9H694 974 aaKnown RBP3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ECHDC1Q9NTX5 307 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZFP57Q9NU63 452 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 WWOXQ9NZC7 414 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 TUBE1Q9UJT0 475 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ZNF580Q9UK33 172 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 SLC7A7Q9UM01 511 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 ICAM5Q9UMF0 924 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 NME7Q9Y5B8 376 aa3.2□□□□□ -1.9
TRAPPC11-207ENST00000511409 GREB1LQ9C091 1923 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 A0A1W2PPM1 405 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 E9PI62 339 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 GAPDHSO14556 408 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 PENKP01210 267 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 RAB40ALP0C0E4 278 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 SMIM18P0DKX4 95 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 MAPK12P53778 367 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ACSM1Q08AH1 577 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ARL16Q0P5N6 197 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 DMP1Q13316 513 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 FAM76BQ5HYJ3 339 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 PLA2G4FQ68DD2 849 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 MFSD12Q6NUT3 480 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 SHQ1Q6PI26 577 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 PPP1R21Q6ZMI0 780 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ANO5Q75V66 913 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ARHGAP22Q7Z5H3 698 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ADCK2Q7Z695 626 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 TMPRSS11BQ86T26 416 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 CDK20Q8IZL9 346 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 TRIML1Q8N9V2 468 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 OR2T12Q8NG77 320 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 OR13J1Q8NGT2 312 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 CCDC107Q8WV48 283 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 SSMEM1Q8WWF3 244 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 ALG14Q96F25 216 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 SCRN2Q96FV2 425 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 THOC1Q96FV9 657 aaKnown RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 SGK494Q96LW2 274 aa3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 INPP4AQ96PE3 977 aaPredicted RBP3.19□□□□□ -1.9
TRAPPC11-207ENST00000511409 RAB3IPQ96QF0 476 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms