RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 EVI5LQ96CN4 794 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 PGLYRP2Q96PD5 576 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 FNBP1Q96RU3 617 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 SPZ1Q9BXG8 430 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 KRT23Q9C075 422 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 NLKQ9UBE8 527 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 MTRRQ9UBK8 725 aa6.42□□□□□ -1.38
USP53-206ENST00000510737 BAZ2BQ9UIF8 2168 aaKnown RBP6.42□□□□□ -1.38
USP53-206ENST00000510737 ABCA7Q8IZY2 2146 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 DOPEY1Q5JWR5 2465 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 FAM149AA5PLN7 773 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 ANTXRLA6NF34 631 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 CASTOR2A6NHX0 329 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 GJB3O75712 270 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 SERPINA4P29622 427 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 CCR10P46092 362 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 PRKCEQ02156 737 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 ITPRIPL2Q3MIP1 535 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 STXBP5Q5T5C0 1151 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 CD300LGQ6UXG3 332 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 NIPA1Q7RTP0 329 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 GLRX5Q86SX6 157 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 PLA2G4DQ86XP0 818 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 TMC8Q8IU68 726 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 SMAP1Q8IYB5 467 aaPredicted RBP6.41□□□□□ -1.38
USP53-206ENST00000510737 PTGR2Q8N8N7 351 aaPredicted RBP6.41□□□□□ -1.38
USP53-206ENST00000510737 RPLP0P6Q8NHW5 317 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 OLIG1Q8TAK6 271 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 RLN3Q8WXF3 142 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 ZNF577Q9BSK1 485 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 GPR88Q9GZN0 384 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 CXCL16Q9H2A7 254 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 TBC1D22BQ9NU19 505 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 TMEM51Q9NW97 253 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 GRHL1Q9NZI5 618 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 IL17BQ9UHF5 180 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 KCND3Q9UK17 655 aa6.41□□□□□ -1.38
USP53-206ENST00000510737 ATXN2Q99700 1313 aaKnown RBP6.41□□□□□ -1.38
USP53-206ENST00000510737 SPTAN1Q13813 2472 aaKnown RBP6.41□□□□□ -1.38
USP53-206ENST00000510737 ABCA12Q86UK0 2595 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 MUC22E2RYF6 1773 aaPredicted RBP6.4□□□□□ -1.38
USP53-206ENST00000510737 PRRG1O14668 218 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 FFAR2O15552 330 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 HNRNPRO43390 633 aaKnown RBP6.4□□□□□ -1.38
USP53-206ENST00000510737 PLEKHA8P1O95397 391 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 ITGA2BP08514 1039 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 SERPINF2P08697 491 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 AMD1P17707 334 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 U2AF2P26368 475 aaKnown RBP eCLIP6.4□□□□□ -1.385e-8■■■■■ 34.6
USP53-206ENST00000510737 SSTR2P30874 369 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 ELF1P32519 619 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 RPS6KA3P51812 740 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 AP2B1P63010 937 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 ROR1Q01973 937 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 GFPT1Q06210 699 aaPredicted RBP6.4□□□□□ -1.38
USP53-206ENST00000510737 PDCLQ13371 301 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 LY6DQ14210 128 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 RPS6KA2Q15349 733 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 NAB2Q15742 525 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 DUOXA1Q1HG43 343 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 FAM69BQ5VUD6 431 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 LPCAT2Q7L5N7 544 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 NAXDQ8IW45 347 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 PRPF31Q8WWY3 499 aaKnown RBP6.4□□□□□ -1.38
USP53-206ENST00000510737 CPB2Q96IY4 423 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 NXF3Q9H4D5 531 aaKnown RBP6.4□□□□□ -1.38
USP53-206ENST00000510737 GKN1Q9NS71 199 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 THAP1Q9NVV9 213 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 SEC63Q9UGP8 760 aaKnown RBP6.4□□□□□ -1.38
USP53-206ENST00000510737 DDX19BQ9UMR2 479 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 NFS1Q9Y697 457 aa6.4□□□□□ -1.38
USP53-206ENST00000510737 NUP205Q92621 2012 aa6.4□□□□□ -1.39
USP53-206ENST00000510737 TSC2P49815 1807 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 IFIT3O14879 490 aaKnown RBP6.39□□□□□ -1.39
USP53-206ENST00000510737 CLGNO14967 610 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 TSPAN1O60635 241 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 CH25HO95992 272 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 GP1BBP13224 206 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 MX1P20591 662 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 FMO4P31512 558 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 P2RY2P41231 377 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 PTPN9P43378 593 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 CRIP2P52943 208 aaPredicted RBP6.39□□□□□ -1.39
USP53-206ENST00000510737 BRWD1-AS2P59051 145 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 TWF1Q12792 350 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 GRIK3Q13003 919 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 RUNX3Q13761 415 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 PFKFB4Q16877 469 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 TAF1BQ53T94 588 aaPredicted RBP6.39□□□□□ -1.39
USP53-206ENST00000510737 CEP85LQ5SZL2 805 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 SLC8B1Q6J4K2 584 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 HAUS6Q7Z4H7 955 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 DEFB119Q8N690 84 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 LMNTD1Q8N9Z9 388 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 TSTD1Q8NFU3 115 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 CRYGNQ8WXF5 182 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 CPT1BQ92523 772 aa6.39□□□□□ -1.39
USP53-206ENST00000510737 TAF15Q92804 592 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP53-206ENST00000510737 CNOT6LQ96LI5 555 aaKnown RBP6.39□□□□□ -1.39
USP53-206ENST00000510737 HPS4Q9NQG7 708 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms