RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 TMX2-CTNND1H3BSU7 103 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 AP5Z1O43299 807 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 ADAM20O43506 726 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 MBD3O95983 291 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 ALDOCP09972 364 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 OR4Q2P0C623 313 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 MCM3P25205 808 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 MGAT1P26572 445 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 IFNAR2P48551 515 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TIRAPP58753 221 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 LINC00310P59036 64 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SF3A2Q15428 464 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 ZNF124Q15973 351 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SNRNP35Q16560 246 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 MPPE1Q53F39 396 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 C1orf220Q5T0J3 134 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 DAB2IPQ5VWQ8 1189 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 PAQR9Q6ZVX9 377 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TDRPQ86YL5 185 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 CCDC13Q8IYE1 715 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 B3GALNT2Q8NCR0 500 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 VPS33AQ96AX1 596 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 PTCD3Q96EY7 689 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 ZNF764Q96H86 408 aaPredicted RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 GPR78Q96P69 363 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 GPATCH1Q9BRR8 931 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 SCNM1Q9BWG6 230 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 DDX43Q9NXZ2 648 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 CHST2Q9Y4C5 530 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 ENTPD2Q9Y5L3 495 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 FAM169AQ9Y6X4 670 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 NCOR2Q9Y618 2525 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TSPAN11A1L157 253 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TMEM110-MUSTN1A8MSY1 372 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TSPAN4O14817 238 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 GPR42O15529 346 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 PRKCGP05129 697 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 GP1BAP07359 652 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 RALAP11233 206 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 IL7RP16871 459 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 PRPH2P23942 346 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 HNF1BP35680 557 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SLC37A1P57057 533 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 EFNB1P98172 346 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 PTP4A2Q12974 167 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 STK4Q13043 487 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 CHAF1BQ13112 559 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 STXBP5Q5T5C0 1151 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 STPG1Q5TH74 334 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 KRT39Q6A163 491 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 KIAA0930Q6ICG6 404 aaPredicted RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 DRICH1Q6PGQ1 229 aaPredicted RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 SHC4Q6S5L8 630 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 KYAT3Q6YP21 454 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 ADGRF3Q8IZF5 1079 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 DENND6BQ8NEG7 585 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 POMGNT1Q8WZA1 660 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 CNOT9Q92600 299 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 ELMOD3Q96FG2 381 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 THOC1Q96FV9 657 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 PAGE5Q96GU1 130 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 CNDP2Q96KP4 475 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 SLX1AQ9BQ83 275 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SNX25Q9H3E2 840 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 MRPL44Q9H9J2 332 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 LSM7Q9UK45 103 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 CAPN7Q9Y6W3 813 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 WASH3PC4AMC7 463 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SUV39H1O43463 412 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TRIAP1O43715 76 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 CEP104O60308 925 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SMC2O95347 1197 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 PRAMEF12O95522 483 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 LSM8O95777 96 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 MBPP02686 304 aaPredicted RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 PPIFP30405 207 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 MPLP40238 635 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 PSG6Q00889 435 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 CAMK2DQ13557 499 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 ALG11Q2TAA5 492 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 EFHC1Q5JVL4 640 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TMEM110Q86TL2 294 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TMEM116Q8NCL8 245 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 FIBINQ8TAL6 211 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 RSC1A1Q92681 617 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 ZFYVE19Q96K21 471 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 FAM84AQ96KN4 292 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SEPT5Q99719 369 aaPredicted RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 NUDT22Q9BRQ3 303 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 REXO4Q9GZR2 422 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 IKZF4Q9H2S9 585 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 TMEM245Q9H330 911 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SPHK2Q9NRA0 654 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 ABCC13Q9NSE7 274 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 DUS2Q9NX74 493 aaKnown RBP4.95□□□□□ -1.62
NEK1-204ENST00000509912 ARL15Q9NXU5 204 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 GTSE1Q9NYZ3 720 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 FAM30AQ9NZY2 134 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 NLKQ9UBE8 527 aa4.95□□□□□ -1.62
NEK1-204ENST00000509912 SLC25A13Q9UJS0 675 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms