RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ARL4DP49703 201 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 GFERP55789 205 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 ARL4CP56559 192 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 PRAMEP78395 509 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 RHDQ02161 417 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 DMPKQ09013 629 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 LAMB3Q13751 1172 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 HSP90AA5PQ58FG0 334 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 TEX35Q5T0J7 233 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 RBM20Q5T481 1227 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 TEDDM1Q5T9Z0 273 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 CACHD1Q5VU97 1274 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 KIAA1614Q5VZ46 1190 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 METRNLQ641Q3 311 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 ANKS6Q68DC2 871 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 NEPROQ6NW34 567 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 ARMC6Q6NXE6 501 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 DUS1LQ6P1R4 473 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 CEACAM20Q6UY09 585 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 FAM92BQ6ZTR7 304 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 NLRP9Q7RTR0 991 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 VASH2Q86V25 355 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 KCNMB4Q86W47 210 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 CNTN4Q8IWV2 1026 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 ZBED8Q8IZ13 594 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 C2CD4AQ8NCU7 369 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 OR2L2Q8NH16 312 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC39A7Q92504 469 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 LINC00615Q96LM1 132 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 RMDN2Q96LZ7 410 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 C12orf66Q96MD2 445 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 TEFMQ96QE5 360 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 TTC1Q99614 292 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 DDA1Q9BW61 102 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 B3GNT4Q9C0J1 378 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 RAB17Q9H0T7 212 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 IARS2Q9NSE4 1012 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 NINJ2Q9NZG7 142 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 PDP2Q9P2J9 529 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 ACSL6Q9UKU0 697 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 NFU1Q9UMS0 254 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 UTP11Q9Y3A2 253 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 PCDHGA3Q9Y5H0 932 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 COLEC10Q9Y6Z7 277 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 TCRBV9S1A1TA0A576 114 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 K7ENP7 123 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ERVH48-1M5A8F1 160 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 IFRD1O00458 451 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 FAM155BO75949 473 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 AHSGP02765 367 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 TPBGLP0DKB5 382 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 MTHFD1P11586 935 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 CCR7P32248 378 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 MAGEA4P43358 317 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 CAPZBP47756 277 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 PREPP48147 710 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 LEPRP48357 1165 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 SARNPP82979 210 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 MC2RQ01718 297 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 GBX1Q14549 363 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ITIH4Q14624 930 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 LONRF1Q17RB8 773 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 DNAJC21Q5F1R6 531 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 SPANXN3Q5MJ09 141 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ZNF470Q6ECI4 717 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 INO80CQ6PI98 192 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ARHGAP22Q7Z5H3 698 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 CCDC25Q86WR0 208 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 CACNA2D3Q8IZS8 1091 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 PDIK1LQ8N165 341 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 LMNTD1Q8N9Z9 388 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 MNS1Q8NEH6 495 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 IFT81Q8WYA0 676 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 RSC1A1Q92681 617 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 PMEPA1Q969W9 287 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 KIAA1143Q96AT1 154 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 FAM136AQ96C01 138 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 CERS2Q96G23 380 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ELMO2Q96JJ3 720 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 BBC3Q96PG8 261 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 FERD3LQ96RJ6 166 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 INSM2Q96T92 566 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ARHGAP9Q9BRR9 750 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ZPBPQ9BS86 351 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 CCM2Q9BSQ5 444 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 OR52A5Q9H2C5 316 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 C20orf96Q9NUD7 363 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 ZC3H7BQ9UGR2 993 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 IKZF3Q9UKT9 509 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 CRYL1Q9Y2S2 319 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 HEBP2Q9Y5Z4 205 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 LOC400499M0QZD8 3231 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 PTPRQQ9UMZ3 2332 aa8.52□□□□□ -1.05
PDLIM5-213ENST00000509357 UBA6A0AVT1 1052 aaPredicted RBP8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 SLC5A10A0PJK1 596 aa8.51□□□□□ -1.05
PDLIM5-213ENST00000509357 HMX2A2RU54 273 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms