RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 GLIS1Q8NBF1 620 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM116Q8NCL8 245 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF480Q8WV37 535 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OXNAD1Q96HP4 312 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 MBOAT7Q96N66 472 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ANKRD27Q96NW4 1050 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 INPP5KQ9BT40 448 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 GSX2Q9BZM3 304 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 ROPN1Q9HAT0 212 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 C1orf123Q9NWV4 160 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OR6C3Q9NZP0 311 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 SAE1Q9UBE0 346 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-209ENST00000508871 KLQ9UEF7 1012 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 IL20RAQ9UHF4 553 aa3.86□□□□□ -1.79
NEDD4-209ENST00000508871 OR6C65A6NJZ3 312 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 E7ENX8 843 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 F8VZ95 297 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ATMINO43313 823 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TOM1L1O75674 476 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 IGHA2P01877 340 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TFRCP02786 760 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CYP1A2P05177 515 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CYP3A4P08684 503 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DARSP14868 501 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PIK3R1P27986 724 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ACAA2P42765 397 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 RPIAP49247 311 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DHPSP49366 369 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 FXR1P51114 621 aaKnown RBP eCLIP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DECR1Q16698 335 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 HERC4Q5GLZ8 1057 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 BEX5Q5H9J7 111 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 E4F1Q66K89 784 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 HMBOX1Q6NT76 420 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 C8orf74Q6P047 294 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 MLKLQ8NB16 471 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 OR9K2Q8NGE7 335 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ARHGEF26Q96DR7 871 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DYNLL2Q96FJ2 89 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ABHD17AQ96GS6 310 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SLX1AQ9BQ83 275 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DPH7Q9BTV6 452 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 C20orf24Q9BUV8 137 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 BTBD2Q9BX70 525 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 FHDC1Q9C0D6 1143 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 BEX1Q9HBH7 125 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF160Q9HCG1 818 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SIRT3Q9NTG7 399 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PGAP2Q9UHJ9 254 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ADAM30Q9UKF2 790 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CDH9Q9ULB4 789 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PTPN22Q9Y2R2 807 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CMAHPQ9Y471 501 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 OR10H1Q9Y4A9 318 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 KAT6AQ92794 2004 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 FAM95CA0A1B0GW59 222 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 A0A1W2PPM1 405 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TCRBV7S2A1N4TA0A589 114 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 KLRF2D3W0D1 207 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 RNF225M0QZC1 329 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 FZD9O00144 591 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DNM1LO00429 736 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DLL1O00548 723 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ADAM20O43506 726 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PEX1O43933 1283 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CBFA2T3O75081 653 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SCGNO76038 276 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ODC1P11926 461 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ANXA7P20073 488 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CST5P28325 142 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 WNT5AP41221 380 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 MANFP55145 182 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DSTNP60981 165 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 YPEL5P62699 121 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SRYQ05066 204 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PDIA5Q14554 519 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 IL13RA2Q14627 380 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 GALNTL6Q49A17 601 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 NCEH1Q6PIU2 408 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PLPPR4Q7Z2D5 763 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CYP4Z1Q86W10 505 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 C4orf32Q8N8J7 132 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ST8SIA2Q92186 375 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 HPS1Q92902 700 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 HAUS1Q96CS2 278 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SPACA9Q96E40 222 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM68Q96MH6 324 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 RAB34Q9BZG1 259 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 THAP2Q9H0W7 228 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ATG10Q9H0Y0 220 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 CNOT10Q9H9A5 744 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 ZBTB26Q9HCK0 441 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 DDX4Q9NQI0 724 aaKnown RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 SPG21Q9NZD8 308 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 PDP1Q9P0J1 537 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-209ENST00000508871 KLHL14Q9P2G3 628 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 MYO1AQ9UBC5 1043 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 STK17AQ9UEE5 414 aa3.85□□□□□ -1.79
NEDD4-209ENST00000508871 A0A1W2PPC4 97 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms