RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SARS2Q9NP81 518 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 EGFL7Q9UHF1 273 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 MAGEL2Q9UJ55 1249 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 SLC25A13Q9UJS0 675 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 AP3M1Q9Y2T2 418 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 MRPS23Q9Y3D9 190 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 PRUNE2Q8WUY3 3088 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 SCN8AQ9UQD0 1980 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 A0A0J9YVX5 310 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 NPEPPSL1A6NEC2 478 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 ARNTLO00327 626 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 PLOD2O00469 737 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 PPP6CO00743 305 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 ECI2O75521 394 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 TSPAN12O95859 305 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT1A6P19224 532 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 CHRM3P20309 590 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT1A1P22309 533 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT1A4P22310 534 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 DCKP27707 260 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 HMOX2P30519 316 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT1A3P35503 534 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT1A5P35504 534 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 PTGER3P43115 390 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 FOXA1P55317 472 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 PRKG2Q13237 762 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 NFATC2Q13469 925 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 TCEAL5Q5H9L2 206 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 AARS2Q5JTZ9 985 aaKnown RBP10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 CCNYL2Q5T2Q4 361 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT3A1Q6NUS8 523 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 EPHX4Q8IUS5 362 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 HID1Q8IV36 788 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 CLDN19Q8N6F1 224 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 RNF217Q8TC41 542 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 CYB5D2Q8WUJ1 264 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 EEF1AKMT1Q8WVE0 214 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 KCNJ9Q92806 393 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 ISG20Q96AZ6 181 aaKnown RBP10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 ISOC1Q96CN7 298 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 RDH12Q96NR8 316 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 NPLQ9BXD5 320 aaPredicted RBP10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 P2RY12Q9H244 342 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 TSR3Q9UJK0 312 aaKnown RBP10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 OAZ3Q9UMX2 235 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 PCDHB3Q9Y5E6 796 aa10.81□□□□□ -0.68
SH3RF1-203ENST00000508685 NCF1BA6NI72 391 aaPredicted RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NCF1CA8MVU1 366 aaPredicted RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 E5RI56 91 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 BTN3A1O00481 513 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NOL3O60936 208 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 GMNNO75496 209 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 RB1P06400 928 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NCF1P14598 390 aaPredicted RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 LHCGRP22888 699 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 PBX2P40425 430 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 VIPR2P41587 438 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 GRSF1Q12849 480 aaKnown RBP eCLIP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 EPS8Q12929 822 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 GPM6BQ13491 265 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 TUBA3CQ13748 450 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CAPRIN1Q14444 709 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CRY1Q16526 586 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 TBC1D25Q3MII6 688 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 LRRC66Q68CR7 880 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CRTC1Q6UUV9 634 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 USP51Q70EK9 711 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 SERPINA9Q86WD7 417 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CPNE9Q8IYJ1 553 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 OR2A12Q8NGT7 310 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 FNDC8Q8TC99 324 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CYGBQ8WWM9 190 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 ECHDC3Q96DC8 303 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 RSPRY1Q96DX4 576 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NSUN5Q96P11 429 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF382Q96SR6 550 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 HGH1Q9BTY7 390 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 SUV39H2Q9H5I1 410 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 ASB8Q9H765 288 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CXorf21Q9HAI6 301 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 TBC1D14Q9P2M4 693 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 TRMT6Q9UJA5 497 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 TNPO3Q9Y5L0 923 aaKnown RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 GLYATL1P3A0A0U1RQE8 302 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 A0A1B0GTW7 788 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 SH3PXD2BA1X283 911 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 DEAF1O75398 565 aaPredicted RBP10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 KATNA1O75449 491 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 ESR1P03372 595 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CDH1P12830 882 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 HLCSP50747 726 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CLCN7P51798 805 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 IL2P60568 153 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 MESP2Q0VG99 397 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 MYBPC3Q14896 1274 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 SMU1Q2TAY7 513 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 CARD16Q5EG05 197 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 NANOGP8Q6NSW7 305 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 RFLNAQ6ZTI6 216 aa10.8□□□□□ -0.68
SH3RF1-203ENST00000508685 GPRIN3Q6ZVF9 776 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms