RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 NPIPA2E9PIF3 369 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 NPIPA3F8WFD2 350 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 SLC33A1O00400 549 aaPredicted RBP8.84□□□□□ -0.99
KLHL3-209ENST00000508657 MAN2B1O00754 1011 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 AP5Z1O43299 807 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 DUX1O43812 170 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 TNFRSF21O75509 655 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 PROCP04070 461 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 FASLGP48023 281 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 CCR8P51685 355 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 FCHO2Q0JRZ9 810 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 FOXC1Q12948 553 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 GTF2H2Q13888 395 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 GTF2H2CQ6P1K8 395 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 SLC39A5Q6ZMH5 540 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 TMC3Q7Z5M5 1100 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 LRRC49Q8IUZ0 686 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 CPNE9Q8IYJ1 553 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 APOPT1Q96IL0 206 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 NINJ2Q9NZG7 142 aa8.84□□□□□ -0.99
KLHL3-209ENST00000508657 CLDN9O95484 217 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 SMIM11AP58511 58 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 POU5F1Q01860 360 aaKnown RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 SGCAQ16586 387 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 BMT2Q1RMZ1 405 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ARMC3Q5W041 872 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 SMYD5Q6GMV2 418 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.83□□□□□ -1
KLHL3-209ENST00000508657 FOXRED2Q8IWF2 684 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 GPR65Q8IYL9 337 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 LRRC52Q8N7C0 313 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 IPPKQ9H8X2 491 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 PCDH18Q9HCL0 1135 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 CCDC163A0A0D9SF12 145 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 UBE2QL1A1L167 161 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 CNTN5O94779 1100 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 LCA5LO95447 670 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 EDN3P14138 238 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 HOXA10P31260 410 aaPredicted RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 STARP49675 285 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ALDH3A2P51648 485 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
KLHL3-209ENST00000508657 C4orf46Q504U0 113 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 CLEC6AQ6EIG7 209 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 TMEM225Q6GV28 225 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 RANBP3LQ86VV4 465 aaPredicted RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 ZDHHC12Q96GR4 267 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ACBD6Q9BR61 282 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 COPS4Q9BT78 406 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 DEFB126Q9BYW3 111 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 LRMDAQ9H2I8 198 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 THAP1Q9NVV9 213 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 COPG2Q9UBF2 871 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 INSL5Q9Y5Q6 135 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 TLL2Q9Y6L7 1015 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 MST1RQ04912 1400 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ZNF878C9JN71 531 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 BLOC1S5-TXNDC5H3BN57 136 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 NFKBIEO00221 500 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 YY2O15391 372 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 OR1I1O60431 355 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 RECQL5O94762 991 aaPredicted RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 ITGA1P56199 1179 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 OR2B6P58173 313 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 NTHL1P78549 312 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 PRKD1Q15139 912 aaPredicted RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 TMEM119Q4V9L6 283 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ABCA11PQ4W5N1 156 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 SPANXN2Q5MJ10 180 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 CLEC12AQ5QGZ9 265 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 IKBIPQ70UQ0 350 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 TMPRSS6Q8IU80 811 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 GFM1Q96RP9 751 aaKnown RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 ITGB1BP2Q9UKP3 347 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 PPM1HQ9ULR3 514 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ERGIC3Q9Y282 383 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 NRP2O60462 931 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 RNGTTO60942 597 aaKnown RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 LYPLA1O75608 230 aaPredicted RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 PGLSO95336 258 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 NOMO3P69849 1222 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ZNF267Q14586 743 aaPredicted RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 NOMO1Q15155 1222 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 OR4C6Q8NH72 309 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ZC3HAV1LQ96H79 300 aaKnown RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 MBOAT7Q96N66 472 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 ZNF285Q96NJ3 590 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 MECRQ9BV79 373 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 TPK1Q9H3S4 243 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 DNAJC18Q9H819 358 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 KBTBD4Q9NVX7 518 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 SAMD4AQ9UPU9 718 aaKnown RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 FER1L4A9Z1Z3 1794 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 MEN1O00255 615 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 NDST3O95803 873 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 MAOBP27338 520 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 EPHA3P29320 983 aa8.83□□□□□ -1
KLHL3-209ENST00000508657 GANABQ14697 944 aaKnown RBP8.83□□□□□ -1
KLHL3-209ENST00000508657 TMEM35AQ53FP2 167 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms