RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PGAM5Q96HS1 289 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 SRSF8Q9BRL6 282 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 C1QTNF1Q9BXJ1 281 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 ECHDC1Q9NTX5 307 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 MRPS28Q9Y2Q9 187 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 LYVE1Q9Y5Y7 322 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 ATRNO75882 1429 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 CLIP1P30622 1438 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 KIAA1107Q9UPP5 1409 aa4.71□□□□□ -1.66
TOPBP1-206ENST00000508524 ARHGAP35Q9NRY4 1499 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 PGPEP1LA6NFU8 196 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 NGFP01138 241 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 FRMD6-AS1P0C7T7 363 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 NMBRP28336 390 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 CLK1P49759 484 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 MAMLD1Q13495 774 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 TUBB2AQ13885 445 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 CRYMQ14894 314 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 GCNT6Q5T4J0 391 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 TBC1D16Q8TBP0 767 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 DAZLQ92904 295 aaKnown RBP4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 MOAP1Q96BY2 351 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 RTP3Q9BQQ7 232 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 TUBB2BQ9BVA1 445 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 OLFML3Q9NRN5 406 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 KRT84Q9NSB2 600 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 PNMA2Q9UL42 364 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 RABGAP1Q9Y3P9 1069 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 MROH1Q8NDA8 1641 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 BLMP54132 1417 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 SETD5Q9C0A6 1442 aa4.7□□□□□ -1.66
TOPBP1-206ENST00000508524 CAMSAP2Q08AD1 1489 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 TMEM2Q9UHN6 1383 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 ASXL1Q8IXJ9 1541 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 CDRT15L2A8MXV6 281 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 F5H0A9 414 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 TCERG1O14776 1098 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 EML2O95834 649 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 RB1P06400 928 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 FAM157CP0CG43 387 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 ACADMP11310 421 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 WNT5AP41221 380 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 PSMC4P43686 418 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 DCAF7P61962 342 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 KRT71Q3SY84 523 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 ADAMTSL4-AS1Q5T5F5 129 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 ALS2CLQ60I27 953 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 ADALQ6DHV7 355 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 ANKRD52Q8NB46 1076 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 OPRPNQ99935 248 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 WDR13Q9H1Z4 485 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 NPAP1Q9NZP6 1156 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 RASAL2Q9UJF2 1139 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 PCDHGA5Q9Y5G8 931 aa4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-206ENST00000508524 PIK3C2BO00750 1634 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 CAMTA1Q9Y6Y1 1673 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 MEIOCA2RUB1 952 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 PI4KAP2A4QPH2 592 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 EPB41L2O43491 1005 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 PRLRP16471 622 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 CEACAM8P31997 349 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 GARSP41250 739 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 CDH11P55287 796 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 RPS18P62269 152 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 DLG2Q15700 870 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 GTDC1Q4AE62 458 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 MCEMP1Q8IX19 187 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 OLIG1Q8TAK6 271 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 PRAC1Q96KF2 57 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 ABHD6Q9BV23 337 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 AMACRQ9UHK6 382 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 SLC7A7Q9UM01 511 aa4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 EXO1Q9UQ84 846 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 SPIN1Q9Y657 262 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-206ENST00000508524 GLI3P10071 1580 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 RTEL1-TNFRSF6BF6WH68 1400 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 FMN1Q68DA7 1419 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 IGKV3D-20A0A0C4DH25 116 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 IGHV4-61A0A0C4DH41 118 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 PRSS51A0A1B0GVH4 220 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 TO15178 435 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 ARHGEF9O43307 516 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 ZFAND5O76080 213 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 IGHV4-59P01825 116 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 CLTBP09497 229 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 SNRPEP62304 92 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 LGALS3BPQ08380 585 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 PNRC1Q12796 327 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 P2RY6Q15077 328 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 LPAL2Q16609 132 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 BHLHB9Q6PI77 547 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 ZNF383Q8NA42 475 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 PPHLN1Q8NEY8 458 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 TMEM143Q96AN5 459 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 GMPPAQ96IJ6 420 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 MPP4Q96JB8 637 aa4.67□□□□□ -1.66
TOPBP1-206ENST00000508524 HHATLQ9HCP6 504 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms