RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SEPHS2Q99611 448 aa4.72□□□□□ -1.65
GYPA-205ENST00000508337 RBM4Q9BWF3 364 aaKnown RBP4.72□□□□□ -1.65
GYPA-205ENST00000508337 ZNF696Q9H7X3 374 aa4.72□□□□□ -1.65
GYPA-205ENST00000508337 K7ENM7 598 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 PSMD14O00487 310 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 GAPDHSO14556 408 aaPredicted RBP4.71□□□□□ -1.66
GYPA-205ENST00000508337 FIBPO43427 364 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 MED24O75448 989 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 AMBPP02760 352 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 PRSS56P0CW18 603 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 DNASE1P24855 282 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 ITGA3P26006 1051 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 CRIP2P52943 208 aaPredicted RBP4.71□□□□□ -1.66
GYPA-205ENST00000508337 TPD52P55327 224 aaPredicted RBP4.71□□□□□ -1.66
GYPA-205ENST00000508337 ERVK11-1P61568 191 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 GRAPQ13588 217 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 PCLAFQ15004 111 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 ALDH1L2Q3SY69 923 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 ELFN2Q5R3F8 820 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 GPR139Q6DWJ6 353 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 CEP57Q86XR8 500 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 WDSUB1Q8N9V3 476 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 MOSPD2Q8NHP6 518 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 EXD1Q8NHP7 514 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 HCAR2Q8TDS4 363 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 RNF128Q8TEB7 428 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 SUSD6Q92537 303 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 ZNF622Q969S3 477 aaKnown RBP eCLIP4.71□□□□□ -1.66
GYPA-205ENST00000508337 SLC22A18Q96BI1 424 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 LRR1Q96L50 414 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 OPA3Q9H6K4 179 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 PDE7BQ9NP56 450 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 ACKR4Q9NPB9 350 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 SLC35C2Q9NQQ7 365 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 OSER1Q9NX31 292 aa4.71□□□□□ -1.66
GYPA-205ENST00000508337 ZHX1Q9UKY1 873 aaPredicted RBP4.71□□□□□ -1.66
GYPA-205ENST00000508337 ISY1Q9ULR0 285 aaKnown RBP4.71□□□□□ -1.66
GYPA-205ENST00000508337 LOC102723996A0A087X1L8 192 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 ZNF197O14709 1029 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 TRMUO75648 421 aaKnown RBP4.7□□□□□ -1.66
GYPA-205ENST00000508337 APOHP02749 345 aaPredicted RBP4.7□□□□□ -1.66
GYPA-205ENST00000508337 EDN1P05305 212 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 CFC1BP0CG36 223 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 CFC1P0CG37 223 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 TRIM21P19474 475 aaKnown RBP4.7□□□□□ -1.66
GYPA-205ENST00000508337 ALDH4A1P30038 563 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 SLC6A6P31641 620 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 CEACAM8P31997 349 aaPredicted RBP4.7□□□□□ -1.66
GYPA-205ENST00000508337 PSMC6P62333 389 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 PRKCZQ05513 592 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 DMPKQ09013 629 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 HSPB3Q12988 150 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 MRGPRG-AS1Q2M3A8 158 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 KIAA1644Q3SXP7 199 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 BMP2KLQ5H9B9 411 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 FFAR4Q5NUL3 377 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 MFSD4BQ5TF39 518 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 ZNF383Q8NA42 475 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 AVL9Q8NBF6 648 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 PTPMT1Q8WUK0 201 aaPredicted RBP4.7□□□□□ -1.66
GYPA-205ENST00000508337 SFXN2Q96NB2 322 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 C16orf70Q9BSU1 422 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 KLHL4Q9C0H6 718 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 MIS12Q9H081 205 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 SIX2Q9NPC8 291 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 WSB2Q9NYS7 404 aaPredicted RBP4.7□□□□□ -1.66
GYPA-205ENST00000508337 CLIC5Q9NZA1 410 aa4.7□□□□□ -1.66
GYPA-205ENST00000508337 MAGED1Q9Y5V3 778 aaPredicted RBP4.7□□□□□ -1.66
GYPA-205ENST00000508337 hCG_1809904A0A1W2PP81 198 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 A0A1W2PPE2 198 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 A0A1W2PR64 198 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 ANKUB1A6NFN9 424 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 PRR32B1ATL7 298 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 E9PI62 339 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 PRKRAO75569 313 aaKnown RBP4.69□□□□□ -1.66
GYPA-205ENST00000508337 CREG1O75629 220 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 GAS8-AS1O95177 125 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 CLPTM1O96005 669 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 PATE4P0C8F1 98 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 ERVK-10P10266 1014 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 CDR2Q01850 454 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 LGALS3BPQ08380 585 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 GPR17Q13304 367 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 PPIGQ13427 754 aaKnown RBP eCLIP4.69□□□□□ -1.66
GYPA-205ENST00000508337 PRPF4BQ13523 1007 aaKnown RBP4.69□□□□□ -1.66
GYPA-205ENST00000508337 KRTAP27-1Q3LI81 207 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 ARMC3Q5W041 872 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 CFAP161Q6P656 301 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 CASC1Q6TDU7 716 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 SYT2Q8N9I0 419 aaPredicted RBP4.69□□□□□ -1.66
GYPA-205ENST00000508337 POMGNT2Q8NAT1 580 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 ADAD2Q8NCV1 583 aaKnown RBP4.69□□□□□ -1.66
GYPA-205ENST00000508337 TSPAN14Q8NG11 270 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 OR5M8Q8NGP6 311 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 SLAMF9Q96A28 289 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 LGALS12Q96DT0 336 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 SPACA9Q96E40 222 aaPredicted RBP4.69□□□□□ -1.66
GYPA-205ENST00000508337 URM1Q9BTM9 101 aaKnown RBP4.69□□□□□ -1.66
GYPA-205ENST00000508337 CENPOQ9BU64 300 aa4.69□□□□□ -1.66
GYPA-205ENST00000508337 NUP85Q9BW27 656 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms