RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 BMPR2Q13873 1038 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 GPR18Q14330 331 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 GRB7Q14451 532 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 ZNF460Q14592 562 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 RASA2Q15283 850 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 MROH9Q5TGP6 573 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 SPRED1Q7Z699 444 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 OR5AR1Q8NGP9 310 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 ANKRD49Q8WVL7 239 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
TCOF1-210ENST00000506767 ASB11Q8WXH4 323 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 UBXN10Q96LJ8 280 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 SLC38A3Q99624 504 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 CCDC3Q9BQI4 270 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 TRIT1Q9H3H1 467 aaKnown RBP12.51□□□□□ -0.41
TCOF1-210ENST00000506767 PPCSQ9HAB8 311 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 SYTL2Q9HCH5 934 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 GPAMQ9HCL2 828 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 EURLQ9NYK6 297 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-210ENST00000506767 POLG2Q9UHN1 485 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 ASF1AQ9Y294 204 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 IKBKGQ9Y6K9 419 aa12.51□□□□□ -0.41
TCOF1-210ENST00000506767 IGHV1OR21-1A0A087WYE8 117 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 A0A1W2PQM1 296 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 NTN3O00634 580 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 PHGDHO43175 533 aaKnown RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 ERLIN1O75477 346 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 RFPL3O75679 317 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 KRT38O76015 456 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 C1orf105O95561 183 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 ALDOAP04075 364 aaKnown RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 CDK4P11802 303 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 CRABP2P29373 138 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 MAGEA12P43365 314 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 MAPK9P45984 424 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 OR1D5P58170 312 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 SIM1P81133 766 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 E2F1Q01094 437 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 BIRC2Q13490 618 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 BEND6Q5SZJ8 279 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 PIWIL4Q7Z3Z4 852 aaKnown RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 CMC1Q7Z7K0 106 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 ZNF761Q86XN6 746 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 TDRPQ86YL5 185 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 CNPY4Q8N129 248 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 FBXO15Q8NCQ5 510 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 ANKRD7Q92527 254 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 FOPNLQ96NB1 174 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 TBC1D10AQ9BXI6 508 aa12.5□□□□□ -0.41
TCOF1-210ENST00000506767 TFB2MQ9H5Q4 396 aaKnown RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 RUVBL2Q9Y230 463 aaKnown RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 COL27A1Q8IZC6 1860 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-210ENST00000506767 ZW10O43264 779 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 KRT37O76014 449 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 RPN2P04844 631 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 SNRPAP09012 282 aaKnown RBP12.49□□□□□ -0.41
TCOF1-210ENST00000506767 FTH1P19P0C7X4 201 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 SLC35E2BP0CK96 405 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 CD1CP29017 333 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 ALDH4A1P30038 563 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 SLC26A3P40879 764 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 CCNFP41002 786 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 CCL7P80098 99 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 GPLD1P80108 840 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 PRKG2Q13237 762 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 KRT33BQ14525 404 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 LGSNQ5TDP6 509 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 TIFABQ6ZNK6 161 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 TAOK1Q7L7X3 1001 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 CCDC91Q7Z6B0 441 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 DCUN1D3Q8IWE4 304 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 MYO1HQ8N1T3 1032 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 Q8N9G6 341 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-210ENST00000506767 OR52E1Q8NGJ3 308 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 MZB1Q8WU39 189 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 SKA2Q8WVK7 121 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-210ENST00000506767 DLG3Q92796 817 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 MTBPQ96DY7 904 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 MENTQ9BUN1 341 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 TWSG1Q9GZX9 223 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 LRRN3Q9H3W5 708 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 SNX15Q9NRS6 342 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 KCNK4Q9NYG8 393 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 OGFRQ9NZT2 677 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 PSMC3IPQ9P2W1 217 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-210ENST00000506767 TSR3Q9UJK0 312 aaKnown RBP12.49□□□□□ -0.41
TCOF1-210ENST00000506767 IKZF3Q9UKT9 509 aa12.49□□□□□ -0.41
TCOF1-210ENST00000506767 APOBEC2Q9Y235 224 aaKnown RBP12.49□□□□□ -0.41
TCOF1-210ENST00000506767 ASXL3Q9C0F0 2248 aa12.48□□□□□ -0.41
TCOF1-210ENST00000506767 RP1P56715 2156 aa12.48□□□□□ -0.41
TCOF1-210ENST00000506767 IQANK1A0A1B0GTG1 560 aa12.48□□□□□ -0.41
TCOF1-210ENST00000506767 ARHGEF33A8MVX0 844 aa12.48□□□□□ -0.41
TCOF1-210ENST00000506767 TRIM49D1C9J1S8 452 aa12.48□□□□□ -0.41
TCOF1-210ENST00000506767 SLC16A5O15375 505 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms