RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 GDI1P31150 447 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 VHLP40337 213 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 AP2B1P63010 937 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 FCHO2Q0JRZ9 810 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 CNTN1Q12860 1018 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 ELAVL3Q14576 367 aaKnown RBP11.92□□□□□ -0.5
LIN54-206ENST00000506560 PTGR1Q14914 329 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 TIGD2Q4W5G0 525 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 C8orf82Q6P1X6 216 aaPredicted RBP11.92□□□□□ -0.5
LIN54-206ENST00000506560 BLOC1S3Q6QNY0 202 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 CYP2R1Q6VVX0 501 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 EZH1Q92800 747 aaPredicted RBP11.92□□□□□ -0.5
LIN54-206ENST00000506560 LRIG1Q96JA1 1093 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 OR2AG1Q9H205 316 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 RDH14Q9HBH5 336 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 PARVBQ9HBI1 364 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 CLEC1BQ9P126 229 aa11.92□□□□□ -0.5
LIN54-206ENST00000506560 NME4O00746 187 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 NVLO15381 856 aaKnown RBP11.91□□□□□ -0.5
LIN54-206ENST00000506560 WDR47O94967 919 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 PEX2P28328 305 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 CASP2P42575 452 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 SEC13P55735 322 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 ERVK-8P63133 956 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 RPL38P63173 70 aaKnown RBP11.91□□□□□ -0.5
LIN54-206ENST00000506560 AP5B1Q2VPB7 878 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 IL23RQ5VWK5 629 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 RAET1GQ6H3X3 334 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 ANKRD54Q6NXT1 300 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 XKR5Q6UX68 686 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 SLC22A15Q8IZD6 547 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 NDE1Q9NXR1 346 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 TMCO1Q9UM00 188 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 USP22Q9UPT9 525 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 LRRC42Q9Y546 428 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 TNRC18O15417 2968 aaPredicted RBP11.91□□□□□ -0.5
LIN54-206ENST00000506560 GFYI3L273 518 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 CBSLP0DN79 551 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 IDO1P14902 403 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 EPB42P16452 691 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 CBSP35520 551 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 P2RY2P41231 377 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
LIN54-206ENST00000506560 DGKQP52824 942 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 MAPRE2Q15555 327 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 MUM1Q2TAK8 710 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 ATP6AP1LQ52LC2 224 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 C6orf10Q5SRN2 563 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 ADNP2Q6IQ32 1131 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 CLHC1Q8NHS4 586 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 UBTD2Q8WUN7 234 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 SPDL1Q96EA4 605 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 SLC6A17Q9H1V8 727 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 TRPV4Q9HBA0 871 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 CROTQ9UKG9 612 aa11.91□□□□□ -0.5
LIN54-206ENST00000506560 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 PDGFRLQ15198 375 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 C2orf27AQ580R0 203 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 RABL3Q5HYI8 236 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 CRTC3Q6UUV7 619 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 DHDDSQ86SQ9 333 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 RGL4Q8IZJ4 473 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 DNAJB14Q8TBM8 379 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 DNAJC9Q8WXX5 260 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 SUSD6Q92537 303 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 MRPL38Q96DV4 380 aaKnown RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 NUS1Q96E22 293 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 NAF1Q96HR8 494 aaKnown RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 SERPINI1Q99574 410 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 INTS7Q9NVH2 962 aaKnown RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 ZNF490Q9ULM2 529 aaPredicted RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 TMEM98Q9Y2Y6 226 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 AK5Q9Y6K8 562 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 KNL1Q8NG31 2342 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 KIF1CO43896 1103 aaKnown RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 LZTS3O60299 673 aaPredicted RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 SLCO2B1O94956 709 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 MATN4O95460 622 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 B3GALT4O96024 378 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 SLC2A4P14672 509 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 DRD3P35462 400 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 ZRSR2Q15696 482 aaKnown RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 PLEKHS1Q5SXH7 462 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 SLC2A7Q6PXP3 512 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 ZNF547Q8IVP9 402 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 LILRA2Q8N149 483 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 TMIEQ8NEW7 156 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 TMEM74Q96NL1 305 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 BRINP2Q9C0B6 783 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 SLC32A1Q9H598 525 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 SPAG4Q9NPE6 437 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 THG1LQ9NWX6 298 aaKnown RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 CMTM6Q9NX76 183 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 TMEM181Q9P2C4 612 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 THAP10Q9P2Z0 257 aaPredicted RBP11.9□□□□□ -0.5
LIN54-206ENST00000506560 CD300AQ9UGN4 299 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms