RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 JMJD7P0C870 316 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 CLCN7P51798 805 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 FRG1Q14331 258 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 PLEKHS1Q5SXH7 462 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 IRGCQ6NXR0 463 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 OTOAQ7RTW8 1153 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 LSMEM2Q8N112 164 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 OR5K2Q8NHB8 316 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 GIMAP7Q8NHV1 300 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 SEC14L1Q92503 715 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 SAYSD1Q9NPB0 183 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 ICKQ9UPZ9 632 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 RAXQ9Y2V3 346 aa17.74■□□□□ 0.43
PDLIM7-216ENST00000506537 CHD6Q8TD26 2715 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 DSPP15924 2871 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CTAGE15A4D2H0 777 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 OR6C74A6NCV1 312 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 ANKRD34CP0C6C1 535 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CTAGE8P0CG41 777 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 FGF3P11487 239 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CHRM3P20309 590 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 ABCG1P45844 678 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CARSP49589 748 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 ABRQ12979 859 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 TEDDM1Q5T9Z0 273 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 FAM92BQ6ZTR7 304 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 PRSS42Q7Z5A4 293 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CLEC14AQ86T13 490 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CTAGE6Q86UF2 777 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 OOSP2Q86WS3 158 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CTAGE4Q8IX94 777 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 TBC1D21Q8IYX1 336 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 ZBTB2Q8N680 514 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 BMPERQ8N8U9 685 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 AGBL5Q8NDL9 886 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 MNS1Q8NEH6 495 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 OR4E2Q8NGC2 313 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 LCN9Q8WX39 176 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 PMEPA1Q969W9 287 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 AARSD1Q9BTE6 412 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 TRIT1Q9H3H1 467 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 TFB2MQ9H5Q4 396 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 XKR8Q9H6D3 395 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 LATS2Q9NRM7 1088 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 HRASLS2Q9NWW9 162 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 OCIAD1Q9NX40 245 aa17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 RUVBL2Q9Y230 463 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-216ENST00000506537 CFAP47Q6ZTR5 3102 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 BTN3A3O00478 584 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 BTN3A1O00481 513 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 KPNA5O15131 536 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 EIF3HO15372 352 aaKnown RBP eCLIP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 AHSGP02765 367 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 POLR2CP19387 275 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 RBMS1P29558 406 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 CSTF2P33240 577 aaKnown RBP eCLIP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 MLLT3P42568 568 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 MAPK10P53779 464 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 ERVPABLB-1P60509 514 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 TIAL1Q01085 375 aaKnown RBP eCLIP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 CAV1Q03135 178 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 ACSBG2Q5FVE4 666 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 KLHL35Q6PF15 583 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 CAPN12Q6ZSI9 719 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 KIAA0408Q6ZU52 694 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 SIDT2Q8NBJ9 832 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 SNIP1Q8TAD8 396 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 GSDMBQ8TAX9 411 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 KCNJ9Q92806 393 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 ZDHHC12Q96GR4 267 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 PPM1MQ96MI6 270 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 ZNF578Q96N58 590 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 NDNQ99608 321 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 PHACTR1Q9C0D0 580 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 SRMSQ9H3Y6 488 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 ZNF768Q9H5H4 540 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 PPANQ9NQ55 473 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 THSD1Q9NS62 852 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 ZDHHC18Q9NUE0 388 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 SIDT1Q9NXL6 827 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 MOCS1Q9NZB8 636 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 DMGDHQ9UI17 866 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 TSR3Q9UJK0 312 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 PLAGL1Q9UM63 463 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 NFS1Q9Y697 457 aa17.72■□□□□ 0.43
PDLIM7-216ENST00000506537 EFCAB7A8K855 629 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 C9orf172C9J069 976 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 E5RI56 91 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 ATP5DP30049 168 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 KPNA2P52292 529 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 GUCY2DQ02846 1103 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 GRB7Q14451 532 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 RBM20Q5T481 1227 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 UNC5DQ6UXZ4 953 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 GALNT7Q86SF2 657 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 FAM129CQ86XR2 697 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 ADGRF3Q8IZF5 1079 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 CFAP61Q8NHU2 1237 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 CD200R1Q8TD46 325 aa17.71■□□□□ 0.43
PDLIM7-216ENST00000506537 PYROXD1Q8WU10 500 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms