RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ZNF549Q6P9A3 640 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 XKRXQ6PP77 449 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 KDELC1Q6UW63 502 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 CLEC20AQ6ZU45 233 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 VN1R5Q7Z5H4 357 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 RIOX2Q8IUF8 465 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 ST13P5Q8NFI4 369 aaPredicted RBP15.61■□□□□ 0.09
SCLT1-208ENST00000506368 HCAR2Q8TDS4 363 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 FRS2Q8WU20 508 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 NDRG1Q92597 394 aaKnown RBP15.61■□□□□ 0.09
SCLT1-208ENST00000506368 EXT2Q93063 718 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 PABPC5Q96DU9 382 aaKnown RBP15.61■□□□□ 0.09
SCLT1-208ENST00000506368 SPATA33Q96N06 139 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 ZBTB18Q99592 522 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 TMEM246Q9BRR3 403 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 PIF1Q9H611 641 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 RBM22Q9NW64 420 aaKnown RBP eCLIP15.61■□□□□ 0.097e-6■■■■□ 24.6
SCLT1-208ENST00000506368 OSER1Q9NX31 292 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 FBXL12Q9NXK8 326 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 NDRG4Q9ULP0 352 aaKnown RBP15.61■□□□□ 0.09
SCLT1-208ENST00000506368 RNF112Q9ULX5 631 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 AKT3Q9Y243 479 aa15.61■□□□□ 0.09
SCLT1-208ENST00000506368 PLXNB2O15031 1838 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 SEC22BO75396 215 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 SLC2A3P11169 496 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 FMO3P31513 532 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 SLC15A1P46059 708 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 CYP4F3Q08477 520 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 GPR50Q13585 617 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 PCBP1Q15365 356 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCLT1-208ENST00000506368 CPZQ66K79 652 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 ATG9BQ674R7 924 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 KDM4DQ6B0I6 523 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 RAB43Q86YS6 212 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 ARHGAP12Q8IWW6 846 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 FAM83FQ8NEG4 500 aaPredicted RBP15.6■□□□□ 0.09
SCLT1-208ENST00000506368 CD99L2Q8TCZ2 262 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 CELF6Q96J87 481 aaKnown RBP15.6■□□□□ 0.09
SCLT1-208ENST00000506368 NSUN5Q96P11 429 aaKnown RBP15.6■□□□□ 0.09
SCLT1-208ENST00000506368 PITX2Q99697 317 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 CFHR5Q9BXR6 569 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 CARS2Q9HA77 564 aaKnown RBP15.6■□□□□ 0.09
SCLT1-208ENST00000506368 SAGE1Q9NXZ1 904 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 RIMKLBQ9ULI2 386 aa15.6■□□□□ 0.09
SCLT1-208ENST00000506368 LCHNA4D1U4 455 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 SUPT3HB4E1H0 165 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 HLA-DQB2P05538 268 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 CA8P35219 290 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 SOX11P35716 441 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 SP3Q02447 781 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 TEKQ02763 1124 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 MAD2L1Q13257 205 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 PON2Q15165 354 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 NKG7Q16617 165 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 NFE2Q16621 373 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ARHGAP36Q6ZRI8 547 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 HFE2Q6ZVN8 426 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 DPP9Q86TI2 863 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 SYTL1Q8IYJ3 562 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 HS3ST5Q8IZT8 346 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ANKK1Q8NFD2 765 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 BLOC1S5Q8TDH9 187 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 MYDGFQ969H8 173 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ZNF382Q96SR6 550 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 DHRS9Q9BPW9 319 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 CDADC1Q9BWV3 514 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ULBP1Q9BZM6 244 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 LTB4R2Q9NPC1 389 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 SEMA4BQ9NPR2 832 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 PLCXD1Q9NUJ7 323 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 PKP3Q9Y446 797 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 COL4A4P53420 1690 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 MIA3Q5JRA6 1907 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 GLP2RO95838 553 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 GOT2P00505 430 aaKnown RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 PCSK2P16519 638 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 CHRNA4P43681 627 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 TIMM50Q3ZCQ8 353 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 YIF1BQ5BJH7 314 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 RAB41Q5JT25 222 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 KIAA1614Q5VZ46 1190 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 SLC27A1Q6PCB7 646 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ALKAL1Q6UXT8 129 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 GPRIN3Q6ZVF9 776 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 CCDC190Q86UF4 302 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 RYBPQ8N488 228 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 NAT16Q8N8M0 369 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 OR6P1Q8NGX9 317 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 GTF3C2Q8WUA4 911 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 SLC13A3Q8WWT9 602 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 RPL3LQ92901 407 aaKnown RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 PYURFQ96I23 114 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ST6GAL2Q96JF0 529 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 TRAF4Q9BUZ4 470 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 REXO4Q9GZR2 422 aaKnown RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ZBTB20Q9HC78 741 aaPredicted RBP15.59■□□□□ 0.09
SCLT1-208ENST00000506368 CFL2Q9Y281 166 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 ANKRD36A6QL64 1941 aa15.59■□□□□ 0.09
SCLT1-208ENST00000506368 PDCD11Q14690 1871 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms