RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 EEF1DP29692 281 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 TXLNAP40222 546 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ACADSBP45954 432 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 SORDQ00796 357 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 DSC2Q02487 901 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF33BQ06732 778 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 KLC1Q07866 573 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 VEZF1Q14119 521 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 MESDQ14696 234 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OR1C1Q15619 314 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RPE65Q16518 533 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 SLC5A12Q1EHB4 618 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 TMEM249Q2WGJ8 235 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 DEFB110Q30KQ9 67 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 GXYLT1Q4G148 440 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 KHDC1Q4VXA5 237 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RAB6CQ53S08 254 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 WIPI1Q5MNZ9 446 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 HENMT1Q5T8I9 393 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 FAM102AQ5T9C2 384 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RIPPLY2Q5TAB7 128 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF468Q5VIY5 522 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 FCRLBQ6BAA4 426 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OLFML1Q6UWY5 402 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 LRRC31Q6UY01 552 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 C20orf204Q6ZNR8 217 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 STXBP4Q6ZWJ1 553 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 NDUFAF7Q7L592 441 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OTOAQ7RTW8 1153 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 BRAPQ7Z569 592 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 PHLDB2Q86SQ0 1253 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 SRLQ86TD4 932 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 LAPTM4BQ86VI4 370 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 CCDC65Q8IXS2 484 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 WDTC1Q8N5D0 677 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RFLNBQ8N5W9 214 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF655Q8N720 491 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OR52N2Q8NGI0 321 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OR5M3Q8NGP4 307 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OR10Q1Q8NGQ4 319 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 EXD1Q8NHP7 514 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 C16orf52Q8NHV5 167 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 CPLX3Q8WVH0 158 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 TEKT4Q8WW24 435 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 KAT5Q92993 513 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 KIAA1191Q96A73 305 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 REPS1Q96D71 796 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 CXorf40BQ96DE9 158 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 CELF6Q96J87 481 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 TMX3Q96JJ7 454 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 IMMP1LQ96LU5 166 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF396Q96N95 335 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 DACH2Q96NX9 599 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 HS3ST6Q96QI5 342 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 MED15Q96RN5 788 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 CPXM1Q96SM3 734 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 KCNK17Q96T54 332 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 EIF3CQ99613 913 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RIOK2Q9BVS4 552 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 SHARPINQ9H0F6 387 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RAB6CQ9H0N0 254 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ATG10Q9H0Y0 220 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 WDCPQ9H6R7 721 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ATP13A3Q9H7F0 1226 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 CATSPERBQ9H7T0 1116 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ARFGAP3Q9NP61 516 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ST7Q9NRC1 585 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 KBTBD4Q9NVX7 518 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 FANCLQ9NW38 375 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RAB20Q9NX57 234 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 TRMT1Q9NXH9 659 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ANKRD10Q9NXR5 420 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 JKAMPQ9P055 326 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ING1Q9UK53 422 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 HPCAL4Q9UM19 191 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 COQ4Q9Y3A0 265 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 PPIL1Q9Y3C6 166 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ALG6Q9Y672 507 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 DNAH9Q9NYC9 4486 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 PLXNB1O43157 2135 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 IGLV3-12A0A075B6K2 115 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 LOC102723996A0A087X1L8 192 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 NSG1A0A0A6YYJ2 146 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 GRID2IPA4D2P6 1211 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 FAM157AC9JC47 383 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 OVOL3O00110 214 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 BTN3A3O00478 584 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 MAP2K7O14733 419 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 MATN3O15232 486 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CTIFO43310 598 aaKnown RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 TCF21O43680 179 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 HS6ST1O60243 411 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 LRIG2O94898 1065 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 NR3C1P04150 777 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 MYBL2P10244 700 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 RHOQP17081 205 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 POLR2CP19387 275 aaPredicted RBP3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CDH3P22223 829 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 CASP1P29466 404 aa3.16□□□□□ -1.9
TCOF1-208ENST00000506063 PRDX3P30048 256 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms