RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 PDK1Q15118 436 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 SIRPB2Q5JXA9 342 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 AGAP7PQ5VUJ5 663 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 ZDHHC20Q5W0Z9 365 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 LINC00696Q6ZRV3 163 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 SHISA6Q6ZSJ9 500 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 AMIGO1Q86WK6 493 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 RFX6Q8HWS3 928 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 PHC3Q8NDX5 983 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 OR52E1Q8NGJ3 308 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 OR2L2Q8NH16 312 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 HM13Q8TCT9 377 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 PROKR1Q8TCW9 393 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 TADA1Q96BN2 335 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 PTERQ96BW5 349 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 DCUN1D1Q96GG9 259 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 LURAP1Q96LR2 239 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 AGAP4Q96P64 663 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 RNF157Q96PX1 679 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 NDC1Q9BTX1 674 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 MAK16Q9BXY0 300 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 PITPNM3Q9BZ71 974 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 XPO4Q9C0E2 1151 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 SLC6A20Q9NP91 592 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 SMOXQ9NWM0 555 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 IL17CQ9P0M4 197 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 CTTNBP2NLQ9P2B4 639 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 KLHL8Q9P2G9 620 aaPredicted RBP6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 SUCOQ9UBS9 1254 aaKnown RBP6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 FAM153AQ9UHL3 310 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 ACSL5Q9ULC5 683 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 HEBP2Q9Y5Z4 205 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 DNMT3AQ9Y6K1 912 aaPredicted RBP6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 AP1M2Q9Y6Q5 423 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 SVILO95425 2214 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 CCDC88CQ9P219 2028 aa6.66□□□□□ -1.34
NPIPB3-203ENST00000504841 ZGRF1Q86YA3 2104 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 POLEQ07864 2286 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 A0A087X0T9 212 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 LRRC10BA6NIK2 292 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 IFRD1O00458 451 aaPredicted RBP6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 GAPDHSO14556 408 aaPredicted RBP6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 JRKO75564 520 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 PROSCO94903 275 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 KRT1P04264 644 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 UQCRHP07919 91 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 STSP08842 583 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 MSL3P1P0C860 447 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 FAM228BP0C875 321 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 TNNT1P13805 278 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 UGT2B7P16662 529 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 NFKB1P19838 968 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 ALAS2P22557 587 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 KDELR1P24390 212 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 PTPN3P26045 913 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 SRSF11Q05519 484 aaKnown RBP6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 PRKD1Q15139 912 aaPredicted RBP6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 TLR1Q15399 786 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 SLC14A2Q15849 920 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 ZIC1Q15915 447 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 NKAIN1Q4KMZ8 207 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 FILIP1LQ4L180 1135 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 BCL7AQ4VC05 210 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 VWA2Q5GFL6 755 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 PRAMEF13Q5VWM6 474 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 RHBDD2Q6NTF9 364 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 SARM1Q6SZW1 724 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 SPESP1Q6UW49 350 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 KDELC1Q6UW63 502 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 GFRALQ6UXV0 394 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 MRGPRGQ86SM5 289 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 BCORP1Q8N888 145 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 CATSPER1Q8NEC5 780 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 OR1N1Q8NGS0 311 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 ZNF398Q8TD17 642 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 ZFPM2Q8WW38 1151 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 ITLN2Q8WWU7 325 aaPredicted RBP6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 THOC3Q96J01 351 aaKnown RBP6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 SLX1AQ9BQ83 275 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 FSD1LQ9BXM9 530 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 AP1M1Q9BXS5 423 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 TRABDQ9H4I3 376 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 FAM96AQ9H5X1 160 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 SOX17Q9H6I2 414 aaPredicted RBP6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 ASB8Q9H765 288 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 CHMP5Q9NZZ3 219 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 HACD3Q9P035 362 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 FKBPLQ9UIM3 349 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 CRLS1Q9UJA2 301 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 ARL5AQ9Y689 179 aa6.65□□□□□ -1.34
NPIPB3-203ENST00000504841 LOC285095A0A1B0GVY8 99 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 CCL21O00585 134 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 SGTAO43765 313 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 SRP72O76094 671 aaKnown RBP6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 F10P00742 488 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 CD63P08962 238 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 RALBP11234 206 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 MMP11P24347 488 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 HTR1EP28566 365 aa6.64□□□□□ -1.35
NPIPB3-203ENST00000504841 PDHA2P29803 388 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms