RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TSPAN8P19075 237 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 PRDX3P30048 256 aaKnown RBP10.14□□□□□ -0.79
TPM3-217ENST00000504663 AKT2P31751 481 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 GGT5P36269 586 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 NUDT1P36639 197 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 CLCNKAP51800 687 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 CDH13P55290 713 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 YPEL5P62699 121 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TRAF3Q13114 568 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 EIF2B5Q13144 721 aaKnown RBP10.14□□□□□ -0.79
TPM3-217ENST00000504663 RPA4Q13156 261 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 FZD2Q14332 565 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 UGT3A2Q3SY77 523 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 SYTL3Q4VX76 610 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 PRAMEF9Q5VWM5 478 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 CAPRIN2Q6IMN6 1127 aaKnown RBP10.14□□□□□ -0.79
TPM3-217ENST00000504663 TSSK4Q6SA08 328 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 C6orf89Q6UWU4 347 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 AMZ2Q86W34 360 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 LRRC56Q8IYG6 542 aaPredicted RBP10.14□□□□□ -0.79
TPM3-217ENST00000504663 CFAP206Q8IYR0 622 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TMEM105Q8N8V8 129 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 CADM4Q8NFZ8 388 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 OR56A4Q8NGH8 313 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 AGAP11Q8TF27 550 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TMEM159Q96B96 161 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 CNDP1Q96KN2 507 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 WDR92Q96MX6 357 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 NRTNQ99748 197 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TCEAL2Q9H3H9 227 aaPredicted RBP10.14□□□□□ -0.79
TPM3-217ENST00000504663 DPEP2Q9H4A9 486 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 PARVBQ9HBI1 364 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 NPHS2Q9NP85 383 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 KLC4Q9NSK0 619 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 MARCOQ9UEW3 520 aaPredicted RBP10.14□□□□□ -0.79
TPM3-217ENST00000504663 RAP2CQ9Y3L5 183 aa10.14□□□□□ -0.79
TPM3-217ENST00000504663 TMEM131Q92545 1883 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 CCDC163A0A0D9SF12 145 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 TMEM221A6NGB7 291 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 H3BM21 787 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 M0R296 226 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 MYO1CO00159 1063 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 SCAMP1O15126 338 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 GUCA1CO95843 209 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 ERGP11308 486 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 GFAPP14136 432 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 VCLP18206 1134 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 CD27P26842 260 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 IMPA1P29218 277 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 GNPDA1P46926 289 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 RABIFP47224 123 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 FOXA1P55317 472 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 CLCQ05315 142 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 ABRQ12979 859 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 SULT1C3Q6IMI6 304 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 DUS1LQ6P1R4 473 aaKnown RBP10.13□□□□□ -0.79
TPM3-217ENST00000504663 LAYNQ6UX15 382 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 UNC5DQ6UXZ4 953 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 Q6ZSR6 202 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 GOLGA7Q7Z5G4 137 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 CUZD1Q86UP6 607 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 DEFB119Q8N690 84 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 CCNYL1Q8N7R7 359 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 CCL4L1Q8NHW4 92 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 PIWIL2Q8TC59 973 aaKnown RBP10.13□□□□□ -0.79
TPM3-217ENST00000504663 NELL1Q92832 810 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 FBXL8Q96CD0 374 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 GRAMD1AQ96CP6 724 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 OR2M4Q96R27 311 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 PKP4Q99569 1192 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 EBF4Q9BQW3 602 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 TRMOQ9BU70 441 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 SHCBP1LQ9BZQ2 653 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 TWSG1Q9GZX9 223 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 NSRP1Q9H0G5 558 aaKnown RBP10.13□□□□□ -0.79
TPM3-217ENST00000504663 WWP1Q9H0M0 922 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 ALG2Q9H553 416 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 CD274Q9NZQ7 290 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 SCHIP1Q9P0W5 487 aaPredicted RBP10.13□□□□□ -0.79
TPM3-217ENST00000504663 KCNK6Q9Y257 313 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 USH1CQ9Y6N9 552 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 DGKBQ9Y6T7 804 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 TTC28Q96AY4 2481 aa10.13□□□□□ -0.79
TPM3-217ENST00000504663 ZDBF2Q9HCK1 2354 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 THADAQ6YHU6 1953 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 KCNE1BA0A087WTH5 132 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 SPTY2D1-AS1A0A0U1RR47 76 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 MATN2O00339 956 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 GPR37L1O60883 481 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 SUPT7LO94864 414 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 HSPA4LO95757 839 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 CELA2BP08218 269 aaPredicted RBP10.12□□□□□ -0.79
TPM3-217ENST00000504663 NEFHP12036 1026 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 GDF5P43026 501 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 HSPA7P48741 367 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 RPIAP49247 311 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 FNTBP49356 437 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 AP1S2P56377 157 aa10.12□□□□□ -0.79
TPM3-217ENST00000504663 SH3BP2P78314 561 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms