RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 POU4F1Q01851 419 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 KCNC4Q03721 635 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 ABRQ12979 859 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 GPR18Q14330 331 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 KRT33BQ14525 404 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 EFTUD2Q15029 972 aaKnown RBP eCLIP11.6□□□□□ -0.555e-8■□□□□ 11.1
PDLIM5-208ENST00000504489 CLPPQ16740 277 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 KLHL38Q2WGJ6 581 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 CCDC157Q569K6 752 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 ACSBG2Q5FVE4 666 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 LRRC8EQ6NSJ5 796 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 DUS1LQ6P1R4 473 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 UNC5DQ6UXZ4 953 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 CACTIN-AS1Q8N1I8 211 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 Q8N9G6 341 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 SIDT2Q8NBJ9 832 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 ATXN7L3BQ96GX2 97 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 ELMO2Q96JJ3 720 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 FERD3LQ96RJ6 166 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 GPR22Q99680 433 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 OLFM1Q99784 485 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 PARD6BQ9BYG5 372 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 ABCG4Q9H172 646 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 EPB41L1Q9H4G0 881 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 KIR3DX1Q9H7L2 352 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 KCNK4Q9NYG8 393 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 POLG2Q9UHN1 485 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 ASF1AQ9Y294 204 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 CACNA1AO00555 2505 aa11.6□□□□□ -0.55
PDLIM5-208ENST00000504489 SPTBP11277 2137 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 A0A1W2PQM1 296 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 TCEA3O75764 348 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 FAM155BO75949 473 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 RPN2P04844 631 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 RPLP0P05388 317 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 MPC1LP0DKB6 136 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 CD1CP29017 333 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 MAPK9P45984 424 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 RGS4P49798 205 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 TAS2R39P59534 338 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 SLC29A2Q14542 456 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 N4BP2L1Q5TBK1 243 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 CDCP2Q5VXM1 449 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 PAQR3Q6TCH7 311 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 DHRS13Q6UX07 377 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 CYHR1Q6ZMK1 362 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 RAB44Q7Z6P3 723 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 PIM3Q86V86 326 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 ZNF761Q86XN6 746 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 PHC3Q8NDX5 983 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 ACVR1CQ8NER5 493 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 OR10G6Q8NH81 332 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 OR5K2Q8NHB8 316 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 AENQ8WTP8 325 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 SLC44A1Q8WWI5 657 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 FOPNLQ96NB1 174 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 DPYSL5Q9BPU6 564 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 TBC1D10AQ9BXI6 508 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 EPB41L4BQ9H329 900 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 TRIT1Q9H3H1 467 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 TFB2MQ9H5Q4 396 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 POPDC3Q9HBV1 291 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 SLC24A2Q9UI40 661 aa11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 MTO1Q9Y2Z2 717 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-208ENST00000504489 C1orf105O95561 183 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 CPNE6O95741 557 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 ITGA2BP08514 1039 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 IL2P60568 153 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 SPIDRQ14159 915 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 EMBQ6PCB8 327 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 TMPRSS12Q86WS5 348 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 RASGRP3Q8IV61 690 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 DCUN1D3Q8IWE4 304 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 CPNE9Q8IYJ1 553 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 OR5AR1Q8NGP9 310 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 CFAP61Q8NHU2 1237 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 EEF1AKMT1Q8WVE0 214 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 SKA2Q8WVK7 121 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 TSPAN17Q96FV3 270 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 PDLIM5Q96HC4 596 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 AHCYL2Q96HN2 611 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 GFM1Q96RP9 751 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 OGFRQ9NZT2 677 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 FETUBQ9UGM5 382 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 ZNF180Q9UJW8 692 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 SLC39A10Q9ULF5 831 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 NFS1Q9Y697 457 aa11.58□□□□□ -0.56
PDLIM5-208ENST00000504489 EXOC1LA0A1B0GW35 172 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 FAM221BA6H8Z2 402 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 D6RAR5 112 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 GFYI3L273 518 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 CASC3O15234 703 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 DUX1O43812 170 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 KDM1AO60341 852 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 PSIP1O75475 530 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 UBXN7O94888 489 aa11.57□□□□□ -0.56
PDLIM5-208ENST00000504489 WISP3O95389 354 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms