RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TMPRSS11EQ9UL52 423 aa12.04□□□□□ -0.48
LSM6-204ENST00000504181 TTLL3Q9Y4R7 772 aa12.04□□□□□ -0.48
LSM6-204ENST00000504181 DNAJC13O75165 2243 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 FAM237BA0A1B0GVD1 139 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 ANKRD62A6NC57 917 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 SIGLEC16A6NMB1 481 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 INAFM1C9JVW0 142 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 BTN3A3O00478 584 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 BTN3A1O00481 513 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 KCNJ13O60928 360 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 TOXO94900 526 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 TSPAN12O95859 305 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 PRR35P0CG20 571 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 ITGAXP20702 1163 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 ALAS2P22557 587 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 CTSCP53634 463 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 CDH6P55285 790 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 GSCP56915 257 aaPredicted RBP12.03□□□□□ -0.48
LSM6-204ENST00000504181 DCDC1P59894 354 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 PPP2R2BQ00005 443 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 HSF1Q00613 529 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 FMO1Q01740 532 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 OLIG2Q13516 323 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 QPCTQ16769 361 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 KRTCAP3Q53RY4 240 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 ERMARDQ5T6L9 678 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 HIBCHQ6NVY1 386 aaPredicted RBP12.03□□□□□ -0.48
LSM6-204ENST00000504181 OVCH1Q7RTY7 1134 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 FKBP10Q96AY3 582 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 MBD6Q96DN6 1003 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 PWWP2AQ96N64 755 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 TTC25Q96NG3 672 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 PEBP4Q96S96 227 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 CLEC4MQ9H2X3 399 aaPredicted RBP12.03□□□□□ -0.48
LSM6-204ENST00000504181 SRMSQ9H3Y6 488 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 CLSTN2Q9H4D0 955 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 WDR54Q9H977 334 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 ZFYVE1Q9HBF4 777 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 SEPT11Q9NVA2 429 aaKnown RBP12.03□□□□□ -0.48
LSM6-204ENST00000504181 ETNK2Q9NVF9 386 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 STMN3Q9NZ72 180 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 CWC15Q9P013 229 aaKnown RBP12.03□□□□□ -0.48
LSM6-204ENST00000504181 ADAM22Q9P0K1 906 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 FAM8A1Q9UBU6 413 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 PCSK1NQ9UHG2 260 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 NOCTQ9UK39 431 aaKnown RBP12.03□□□□□ -0.48
LSM6-204ENST00000504181 EDARQ9UNE0 448 aa12.03□□□□□ -0.48
LSM6-204ENST00000504181 MPDZO75970 2070 aa12.02□□□□□ -0.48
LSM6-204ENST00000504181 EIF3CLB5ME19 914 aaKnown RBP12.02□□□□□ -0.49
LSM6-204ENST00000504181 NPIPA5E9PKD4 350 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 WIPF1O43516 503 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 ZRANB2O95218 330 aaKnown RBP eCLIP12.02□□□□□ -0.49
LSM6-204ENST00000504181 MLYCDO95822 493 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 MT-CYBP00156 380 aaPredicted RBP12.02□□□□□ -0.49
LSM6-204ENST00000504181 CHRNB2P17787 502 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 CA4P22748 312 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 SPAM1P38567 509 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 GABRA4P48169 554 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 OGDHQ02218 1023 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 ALDH6A1Q02252 535 aaKnown RBP12.02□□□□□ -0.49
LSM6-204ENST00000504181 DPYSQ14117 519 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 KRT33BQ14525 404 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 VWA3BQ502W6 1294 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 DNAJC24Q6P3W2 148 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 CAMKMTQ7Z624 323 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 C19orf47Q8N9M1 422 aaKnown RBP12.02□□□□□ -0.49
LSM6-204ENST00000504181 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.02□□□□□ -0.49
LSM6-204ENST00000504181 C8orf44Q96CB5 159 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 EIF3CQ99613 913 aaKnown RBP12.02□□□□□ -0.49
LSM6-204ENST00000504181 KCNJ16Q9NPI9 418 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 MAN1B1Q9UKM7 699 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 NPIPA1Q9UND3 350 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 SHOC2Q9UQ13 582 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.49
LSM6-204ENST00000504181 OR5H15A6NDH6 313 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 OR2AG2A6NM03 316 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 ANKRD66B4E2M5 251 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 PRRG2O14669 202 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 MAP2K7O14733 419 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 CELA2AP08217 269 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 PIRTP0C851 137 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 ACPPP15309 386 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 HOXC12P31275 282 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 NSFP46459 744 aaKnown RBP12.01□□□□□ -0.49
LSM6-204ENST00000504181 RPL26P61254 145 aaKnown RBP12.01□□□□□ -0.49
LSM6-204ENST00000504181 CDR2Q01850 454 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 DEFB113Q30KQ7 82 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 ATP13A5Q4VNC0 1218 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 ZNF766Q5HY98 468 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 METRNLQ641Q3 311 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 DPY19L2P1Q6NXN4 242 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 TLDC1Q6P9B6 456 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 TTLL10Q6ZVT0 673 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 COX15Q7KZN9 410 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 TRIM73Q86UV7 250 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 ZNF677Q86XU0 584 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 ZZZ3Q8IYH5 903 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 EID3Q8N140 333 aa12.01□□□□□ -0.49
LSM6-204ENST00000504181 MARVELD2Q8N4S9 558 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms