RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ABHD17AQ96GS6 310 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 RANBP9Q96S59 729 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 PAK5Q9P286 719 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 RIMKLBQ9ULI2 386 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 POLHQ9Y253 713 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 FARSAQ9Y285 508 aaKnown RBP11.61□□□□□ -0.55
MED28-203ENST00000503945 ASF1AQ9Y294 204 aa11.61□□□□□ -0.55
MED28-203ENST00000503945 CDC14CA4D256 554 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 CLEC18AA5D8T8 446 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 OR51F1A6NGY5 319 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 AP3B1O00203 1094 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 BTN3A3O00478 584 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 CPNE3O75131 537 aaKnown RBP11.6□□□□□ -0.55
MED28-203ENST00000503945 TIAF1O95411 115 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 CCDC175P0C221 793 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 PTPN4P29074 926 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 PRAMEP78395 509 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 BOP1Q14137 746 aaKnown RBP11.6□□□□□ -0.55
MED28-203ENST00000503945 ZNF658BQ4V348 819 aaPredicted RBP11.6□□□□□ -0.55
MED28-203ENST00000503945 FASTKD1Q53R41 847 aaKnown RBP11.6□□□□□ -0.55
MED28-203ENST00000503945 TSTD2Q5T7W7 516 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 FBXO38Q6PIJ6 1188 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 CLEC18BQ6UXF7 455 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 PACS1Q6VY07 963 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 LURAP1LQ8IV03 231 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 TBC1D21Q8IYX1 336 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 CLEC18CQ8NCF0 446 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 OR52E1Q8NGJ3 308 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 C9orf43Q8TAL5 461 aaPredicted RBP11.6□□□□□ -0.55
MED28-203ENST00000503945 CT55Q8WUE5 264 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 CPT1BQ92523 772 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 MR1Q95460 341 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 ZNF501Q96CX3 271 aaPredicted RBP11.6□□□□□ -0.55
MED28-203ENST00000503945 CLIP3Q96DZ5 547 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 PPM1MQ96MI6 270 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 TSSK1BQ9BXA7 367 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 SLC7A5P2Q9GIP4 190 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 AKIRIN1Q9H9L7 192 aaPredicted RBP11.6□□□□□ -0.55
MED28-203ENST00000503945 LZTFL1Q9NQ48 299 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 HOMER3Q9NSC5 361 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 ANAPC2Q9UJX6 822 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 POMT2Q9UKY4 750 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 BTRCQ9Y297 605 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 ZKSCAN5Q9Y2L8 839 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 KCNMB2Q9Y691 235 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 PRSS21Q9Y6M0 314 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 RELNP78509 3460 aa11.6□□□□□ -0.55
MED28-203ENST00000503945 MKRN2OSH3BPM6 223 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 MEN1O00255 615 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 BTN3A1O00481 513 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 NRDCO43847 1150 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 GOT2P00505 430 aaKnown RBP11.59□□□□□ -0.55
MED28-203ENST00000503945 FOXN2P32314 431 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 RPL22P35268 128 aaKnown RBP11.59□□□□□ -0.55
MED28-203ENST00000503945 GRIA1P42261 906 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 NPY2RP49146 381 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 SEMA5AQ13591 1074 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 SYTL3Q4VX76 610 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 PCID2Q5JVF3 399 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 ATP1A1-AS1Q5TC04 95 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 DRICH1Q6PGQ1 229 aaPredicted RBP11.59□□□□□ -0.55
MED28-203ENST00000503945 AFTPHQ6ULP2 937 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 UNC5AQ6ZN44 842 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 ZNF662Q6ZS27 426 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 PRUNE1Q86TP1 453 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 ADGRF3Q8IZF5 1079 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 PPHLN1Q8NEY8 458 aaKnown RBP11.59□□□□□ -0.55
MED28-203ENST00000503945 OR13J1Q8NGT2 312 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 ASZ1Q8WWH4 475 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 THAP4Q8WY91 577 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 N4BP2L2Q92802 583 aaPredicted RBP11.59□□□□□ -0.55
MED28-203ENST00000503945 PEX13Q92968 403 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 SGSM3Q96HU1 749 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 TLR10Q9BXR5 811 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 XKR8Q9H6D3 395 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 CASS4Q9NQ75 786 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 CHRAC1Q9NRG0 131 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 LATS2Q9NRM7 1088 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 ACTR10Q9NZ32 417 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 BFARQ9NZS9 450 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 SLC2A6Q9UGQ3 507 aa11.59□□□□□ -0.55
MED28-203ENST00000503945 TDRKHQ9Y2W6 561 aaKnown RBP11.59□□□□□ -0.55
MED28-203ENST00000503945 SLC5A10A0PJK1 596 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 TMEM150CB9EJG8 249 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
MED28-203ENST00000503945 OR1I1O60431 355 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 FGGP02679 453 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 HBQ1P09105 142 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 MSL3P1P0C860 447 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 ZSCAN5DPP0CG00 497 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 GP1BBP13224 206 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 CYP2A7P20853 494 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 ACADLP28330 430 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 SHMT2P34897 504 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 HSPA14Q0VDF9 509 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 AARS2Q5JTZ9 985 aaKnown RBP11.58□□□□□ -0.56
MED28-203ENST00000503945 PLEKHS1Q5SXH7 462 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 NAPRTQ6XQN6 538 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 SYVN1Q86TM6 617 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 LRRC8AQ8IWT6 810 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms