RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ATG13O75143 517 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 KAT7O95251 611 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 C6P13671 934 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 EMX2Q04743 252 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 RCAN2Q14206 197 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 HOMEZQ8IX15 550 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 HIPK4Q8NE63 616 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 KXD1Q9BQD3 176 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 GPATCH1Q9BRR8 931 aaKnown RBP20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 CCM2Q9BSQ5 444 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 C1orf50Q9BV19 199 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 SPAG4Q9NPE6 437 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 MRPL40Q9NQ50 206 aaKnown RBP20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 ADA2Q9NZK5 511 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 ZIM2Q9NZV7 527 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 MYO9BQ13459 2157 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC5A10A0PJK1 596 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 C9JVG2 144 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 INPP4BO15327 924 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 BCAS2O75934 225 aaPredicted RBP20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 GSTM1P09488 218 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 GSTM4Q03013 218 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 DPTQ07507 201 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 FLOT2Q14254 428 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 ZNF658BQ4V348 819 aaPredicted RBP20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 TLDC1Q6P9B6 456 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 MMAAQ8IVH4 418 aaKnown RBP20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 MCOLN3Q8TDD5 553 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 GLMNQ92990 594 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 ELSPBP1Q96BH3 223 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 NUS1Q96E22 293 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 ZNF570Q96NI8 536 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 HBEGFQ99075 208 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 HDAC8Q9BY41 377 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 CD300AQ9UGN4 299 aa20.86■□□□□ 0.93
UBE2D3-216ENST00000503742 H3BNX3 289 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 NVLO15381 856 aaKnown RBP20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 PSIP1O75475 530 aaKnown RBP20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 MSX2P35548 267 aaPredicted RBP20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 UFM1P61960 85 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 ATAT1Q5SQI0 421 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 EGFLAMQ63HQ2 1017 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 TMEM220Q6QAJ8 160 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 LAYNQ6UX15 382 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 TRIM46Q7Z4K8 759 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 DSG4Q86SJ6 1040 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 SPDL1Q96EA4 605 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC45A3Q96JT2 553 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC29A3Q9BZD2 475 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 ZDHHC4Q9NPG8 344 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 DYRK4Q9NR20 520 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 SUCOQ9UBS9 1254 aaKnown RBP20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 BCAP29Q9UHQ4 241 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 A0A1W2PP18 115 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 C1QTNF3-AMACRE9PGA6 284 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 K7ESM1 405 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 ANGPT2O15123 496 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 MMP20O60882 483 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC22A3O75751 556 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 CLDN9O95484 217 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 BAG2O95816 211 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 EPHX1P07099 455 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 GRIA2P42262 883 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 NR6A1Q15406 480 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 PTCHD3Q3KNS1 767 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 CMPK2Q5EBM0 449 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 PARM1Q6UWI2 310 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 USP7Q93009 1102 aa20.85■□□□□ 0.93
UBE2D3-216ENST00000503742 ZFC3H1O60293 1989 aaKnown RBP20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 PRORSD1PA6NEY8 169 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 MANBAO00462 879 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 FFAR3O14843 346 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 GPR42O15529 346 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 LAMP2P13473 410 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 P2RY2P41231 377 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 TAF11Q15544 211 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 SMU1Q2TAY7 513 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 AP5B1Q2VPB7 878 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 GGTA1PQ4G0N0 100 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 BCL7AQ4VC05 210 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 NEK5Q6P3R8 708 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 DHDDSQ86SQ9 333 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 PROKR1Q8TCW9 393 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 FGF14Q92915 247 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 TMEM159Q96B96 161 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 FBXL8Q96CD0 374 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 ASB9Q96DX5 294 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 PPP3R2Q96LZ3 170 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 HOPXQ9BPY8 73 aaPredicted RBP20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 S1PR5Q9H228 398 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 KLQ9UEF7 1012 aa20.84■□□□□ 0.93
UBE2D3-216ENST00000503742 ASPDHA6ND91 283 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 FXYD1O00168 92 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 SLC28A1O00337 649 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 MAP3K7O43318 606 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 LILRB5O75023 590 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 ULK1O75385 1050 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 IL12AP29459 219 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 ENPP2Q13822 863 aa20.83■□□□□ 0.93
UBE2D3-216ENST00000503742 TRIM25Q14258 630 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms