RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 GIPC1O14908 333 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 RAD51BO15315 384 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 NRP2O60462 931 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 CHEK2O96017 543 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 C1SP09871 688 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 HGFP14210 728 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 MLC1Q15049 377 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
USP46-204ENST00000503060 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 GDPD4Q6W3E5 623 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 RNF111Q6ZNA4 994 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 RFLNAQ6ZTI6 216 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 DHDDSQ86SQ9 333 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 MIER2Q8N344 545 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 PDPRQ8NCN5 879 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 OR2A12Q8NGT7 310 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 KLHL32Q96NJ5 620 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 TUBA1CQ9BQE3 449 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 B3GNT4Q9C0J1 378 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 SERHL2Q9H4I8 314 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 PPP1R14DQ9NXH3 145 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 PDP2Q9P2J9 529 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 B4GALT6Q9UBX8 382 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 SH3BGRL2Q9UJC5 107 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 ERVW-1Q9UQF0 538 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 TRIM38O00635 465 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 TRIM24O15164 1050 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 FFAR2O15552 330 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 OR4F21O95013 312 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 CAPNS1P04632 268 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 PRR35P0CG20 571 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 CEBPBP17676 345 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 POLR2EP19388 210 aaKnown RBP11.36□□□□□ -0.59
USP46-204ENST00000503060 NSG1P42857 185 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 RECQLP46063 649 aaPredicted RBP11.36□□□□□ -0.59
USP46-204ENST00000503060 FLOT2Q14254 428 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 C18orf21Q32NC0 220 aaPredicted RBP11.36□□□□□ -0.59
USP46-204ENST00000503060 XKR7Q5GH72 579 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 TMEM215Q68D42 235 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 HACD2Q6Y1H2 254 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 ZNF600Q6ZNG1 722 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 KBTBD2Q8IY47 623 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 ADGRG2Q8IZP9 1017 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 AHI1Q8N157 1196 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 RNF148Q8N7C7 305 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 NAT16Q8N8M0 369 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 MYLIPQ8WY64 445 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 ING5Q8WYH8 240 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 OTUB2Q96DC9 234 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 SLC2A11Q9BYW1 496 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 BCAP29Q9UHQ4 241 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 ADAMTS6Q9UKP5 1117 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 OARD1Q9Y530 152 aa11.36□□□□□ -0.59
USP46-204ENST00000503060 C5orf67F2Z3F1 127 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 H3BNX3 289 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 ARHGEF15O94989 841 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 PRKAR1BP31321 381 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 PSMD8P48556 350 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 NME5P56597 212 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 ERVPABLB-1P60509 514 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 MS4A2Q01362 244 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 ELOAQ14241 798 aaKnown RBP11.35□□□□□ -0.59
USP46-204ENST00000503060 GSTA3Q16772 222 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 ATP13A5Q4VNC0 1218 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 TMEM259Q4ZIN3 620 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 LRRC73Q5JTD7 316 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 ZDHHC20Q5W0Z9 365 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 OGFOD2Q6N063 350 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 SPATA19Q7Z5L4 167 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 GALNT13Q8IUC8 556 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 OR52B6Q8NGF0 335 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 MRGPRX3Q96LB0 322 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 COPS8Q99627 209 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 PFDN4Q9NQP4 134 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 LATS2Q9NRM7 1088 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 RASSF1Q9NS23 344 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 ADA2Q9NZK5 511 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 FAM221AA4D161 298 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 BBIP1A8MTZ0 92 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 E7ENX8 843 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 NR5A2O00482 541 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 ZNF197O14709 1029 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 SLC9A3R1O14745 358 aaPredicted RBP11.35□□□□□ -0.59
USP46-204ENST00000503060 RNGTTO60942 597 aaKnown RBP11.35□□□□□ -0.59
USP46-204ENST00000503060 BCAS2O75934 225 aaPredicted RBP11.35□□□□□ -0.59
USP46-204ENST00000503060 MATN4O95460 622 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 IDO1P14902 403 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 MSX2P35548 267 aaPredicted RBP11.35□□□□□ -0.59
USP46-204ENST00000503060 SPINT3P49223 89 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 POLR2LP62875 67 aaKnown RBP11.35□□□□□ -0.59
USP46-204ENST00000503060 GTF2H2Q13888 395 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 MAP7Q14244 749 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 TTLL9Q3SXZ7 439 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 GTF2H2CQ6P1K8 395 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 SCIMPQ6UWF3 145 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 GOLGA7Q7Z5G4 137 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 CDYL2Q8N8U2 506 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 GDPD5Q8WTR4 605 aa11.35□□□□□ -0.59
USP46-204ENST00000503060 CYB5D2Q8WUJ1 264 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms