RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 LOXL2Q9Y4K0 774 aa16.31■□□□□ 0.2
PRKCB-210ENST00000498739 A0A1W2PNU3 283 aaPredicted RBP16.3■□□□□ 0.2
PRKCB-210ENST00000498739 TCRBV9S1A1TA0A576 114 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 PMS2P1A4D2B8 440 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 OR5K3A6NET4 321 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 PIAS1O75925 651 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 C9P02748 559 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 RPN2P04844 631 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 HGFP14210 728 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 ATP5DP30049 168 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 GPX6P59796 221 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 EIF3IQ13347 325 aaKnown RBP16.3■□□□□ 0.2
PRKCB-210ENST00000498739 CUL1Q13616 776 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 GBX1Q14549 363 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 ACSBG2Q5FVE4 666 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 ARMC6Q6NXE6 501 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 UNC5DQ6UXZ4 953 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 CEP128Q6ZU80 1094 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 STRA8Q7Z7C7 330 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 SLC26A11Q86WA9 606 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 FBXO39Q8N4B4 442 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 GPATCH11Q8N954 259 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 MDM1Q8TC05 714 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 FOPNLQ96NB1 174 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 FMO2Q99518 471 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 NRTNQ99748 197 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 CMKLR1Q99788 373 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 SRMSQ9H3Y6 488 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 TFB2MQ9H5Q4 396 aaKnown RBP16.3■□□□□ 0.2
PRKCB-210ENST00000498739 XKR8Q9H6D3 395 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 LRRC4CQ9HCJ2 640 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 SMYD2Q9NRG4 433 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 HRASLS2Q9NWW9 162 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 NSMCE4AQ9NXX6 385 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 PDP2Q9P2J9 529 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 TRMT6Q9UJA5 497 aaKnown RBP16.3■□□□□ 0.2
PRKCB-210ENST00000498739 RUVBL2Q9Y230 463 aaKnown RBP16.3■□□□□ 0.2
PRKCB-210ENST00000498739 DHRS7Q9Y394 339 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 PSAT1Q9Y617 370 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 NFS1Q9Y697 457 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 NCOR2Q9Y618 2525 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 PIKFYVEQ9Y2I7 2098 aa16.3■□□□□ 0.2
PRKCB-210ENST00000498739 PLD2O14939 933 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 HGSO14964 777 aaPredicted RBP16.29■□□□□ 0.2
PRKCB-210ENST00000498739 KDM1AO60341 852 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 RASSF9O75901 435 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 JMJD7P0C870 316 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 POLR2CP19387 275 aaPredicted RBP16.29■□□□□ 0.2
PRKCB-210ENST00000498739 ECHS1P30084 290 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 CSTF2P33240 577 aaKnown RBP eCLIP16.29■□□□□ 0.2
PRKCB-210ENST00000498739 LSSP48449 732 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 PPP1CAP62136 330 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 CYP4F3Q08477 520 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 PRKAA1Q13131 559 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 KLHL38Q2WGJ6 581 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 UGT3A1Q6NUS8 523 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 FAM92BQ6ZTR7 304 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 AMIGO1Q86WK6 493 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 SPNS2Q8IVW8 549 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 DCUN1D3Q8IWE4 304 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 IFT20Q8IY31 132 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 CD200R1Q8TD46 325 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 INPP5DQ92835 1189 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 ZDHHC12Q96GR4 267 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 RAB33BQ9H082 229 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 CCDC86Q9H6F5 360 aaKnown RBP16.29■□□□□ 0.2
PRKCB-210ENST00000498739 TAS2R13Q9NYV9 303 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 KLHL42Q9P2K6 505 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 EPHA6Q9UF33 1036 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 PISDQ9UG56 409 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 CIDEBQ9UHD4 219 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 CORO1CQ9ULV4 474 aaPredicted RBP16.29■□□□□ 0.2
PRKCB-210ENST00000498739 PLAGL1Q9UM63 463 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 ICKQ9UPZ9 632 aa16.29■□□□□ 0.2
PRKCB-210ENST00000498739 CXorf49A8MYA2 514 aaPredicted RBP16.28■□□□□ 0.2
PRKCB-210ENST00000498739 BRINP1O60477 761 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 SPAG6O75602 509 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 ITIH1P19827 911 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 STX2P32856 288 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 SHMT2P34897 504 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 BDKRB1P46663 353 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 CDKN2DP55273 166 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 TEX35Q5T0J7 233 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 HECTD2Q5U5R9 776 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 FAM45BPQ6NSW5 357 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 TTC23LQ6PF05 361 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 ARHGAP22Q7Z5H3 698 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 CTAGE3PQ8IX95 158 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 CPNE9Q8IYJ1 553 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 AGBL5Q8NDL9 886 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 FAM45AQ8TCE6 357 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 FBF1Q8TES7 1133 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 ELMO2Q96JJ3 720 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 CNTNAP3BQ96NU0 1288 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 CNTNAP3Q9BZ76 1288 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 TSPYL1Q9H0U9 437 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 TXNDC16Q9P2K2 825 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 NFU1Q9UMS0 254 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 PCDHGA8Q9Y5G5 932 aa16.28■□□□□ 0.2
PRKCB-210ENST00000498739 GSAPA4D1B5 854 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms