RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 SPANXN3Q5MJ09 141 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 CTSL3PQ5NE16 218 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 ZNF470Q6ECI4 717 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 TTC23LQ6PF05 361 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 VRK3Q8IV63 474 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 DENND6AQ8IWF6 608 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 OR5K2Q8NHB8 316 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 SKA2Q8WVK7 121 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-213ENST00000498495 C16orf45Q96MC5 204 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-213ENST00000498495 BIRC8Q96P09 236 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 OR6C1Q96RD1 312 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 ZPBPQ9BS86 351 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 CCDC68Q9H2F9 335 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 XKR8Q9H6D3 395 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 IARS2Q9NSE4 1012 aaKnown RBP12.44□□□□□ -0.42
HSPG2-213ENST00000498495 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 CDYLQ9Y232 598 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 CEP295Q9C0D2 2601 aa12.44□□□□□ -0.42
HSPG2-213ENST00000498495 BPTFQ12830 3046 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 IGHV5-51A0A0C4DH38 117 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 GSAPA4D1B5 854 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 TLCD2A6NGC4 264 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 STMND1H3BQB6 276 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 BTN3A3O00478 584 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 NIPSNAP2O75323 286 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 BANF1O75531 89 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 SEC31AO94979 1220 aaKnown RBP12.43□□□□□ -0.42
HSPG2-213ENST00000498495 RPN2P04844 631 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 NELFEP18615 380 aaKnown RBP12.43□□□□□ -0.42
HSPG2-213ENST00000498495 CDH3P22223 829 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 PRDX3P30048 256 aaKnown RBP12.43□□□□□ -0.42
HSPG2-213ENST00000498495 ELK3P41970 407 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 UCNP55089 124 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 ARL4CP56559 192 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 SH3BP2P78314 561 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 C2orf54Q08AI8 447 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 CLN3Q13286 438 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 TGIF1Q15583 401 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 ZNF789Q5FWF6 425 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 HP1BP3Q5SSJ5 553 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-213ENST00000498495 PLEKHS1Q5SXH7 462 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 CYB5D1Q6P9G0 228 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 KCNMB4Q86W47 210 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 KMT5CQ86Y97 462 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 SIDT2Q8NBJ9 832 aaKnown RBP12.43□□□□□ -0.42
HSPG2-213ENST00000498495 PMEPA1Q969W9 287 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 PWWP2AQ96N64 755 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 ERP44Q9BS26 406 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 FAM167BQ9BTA0 163 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 APMAPQ9HDC9 416 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 FBXO6Q9NRD1 293 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-213ENST00000498495 SEMA5BQ9P283 1151 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 FBXO5Q9UKT4 447 aa12.43□□□□□ -0.42
HSPG2-213ENST00000498495 PIPSLA2A3N6 862 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 C2orf74A8MZ97 194 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 BTN3A1O00481 513 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 MAP3K7O43318 606 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 HAUS5O94927 633 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 ZBTB11O95625 1053 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 ERVK-10P10266 1014 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 SHMT2P34897 504 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 SLC1A2P43004 574 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 RPL21P46778 160 aaKnown RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 KPNA2P52292 529 aaKnown RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 TMPRSS3P57727 454 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 CXADRP78310 365 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 HSD11B2P80365 405 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 ACY1Q03154 408 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 CALCOCO2Q13137 446 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 IL11RAQ14626 422 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 CRYMQ14894 314 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 HIF1AQ16665 826 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 MANEAQ5SRI9 462 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 TMTC4Q5T4D3 741 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 UNC5DQ6UXZ4 953 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 UNC5AQ6ZN44 842 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 CCDC81Q6ZN84 652 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 DTX1Q86Y01 620 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 RASGRP3Q8IV61 690 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 IGDCC3Q8IVU1 814 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 ADGRF3Q8IZF5 1079 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 UNC5BQ8IZJ1 945 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 CARFQ8N187 725 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 ZNF592Q92610 1267 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 FAM136AQ96C01 138 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 LRRC39Q96DD0 335 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 CRELD1Q96HD1 420 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 ELMO2Q96JJ3 720 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 SLC41A2Q96JW4 573 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 FOPNLQ96NB1 174 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 CCNL2Q96S94 520 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 NRTNQ99748 197 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 DPH5Q9H2P9 285 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 PDE7BQ9NP56 450 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 PPANQ9NQ55 473 aaKnown RBP12.42□□□□□ -0.42
HSPG2-213ENST00000498495 LATS2Q9NRM7 1088 aa12.42□□□□□ -0.42
HSPG2-213ENST00000498495 C1GALT1Q9NS00 363 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms