RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 RNF150Q9ULK6 438 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 MAP3K2Q9Y2U5 619 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 ABCC3O15438 1527 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 PRDM15P57071 1507 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 EMSYQ7Z589 1322 aa5.93□□□□□ -1.46
BRCA1-224ENST00000497488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.93□□□□□ -1.46
BRCA1-224ENST00000497488 MYO3AQ8NEV4 1616 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 NPATQ14207 1427 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 UHRF1BP1Q6BDS2 1440 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 PZPP20742 1482 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 CXorf65A6NEN9 183 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 DDTLA6NHG4 134 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 DUXAA6NLW8 204 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 FOXO6A8MYZ6 492 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 VWC2LB2RUY7 222 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 KIF1CO43896 1103 aaKnown RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 ERLIN1O75477 346 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 DDX5P17844 614 aaKnown RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 UGT1A6P19224 532 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 CD22P20273 847 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 CYP2A7P20853 494 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 UBA1P22314 1058 aaKnown RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 PCSK6P29122 969 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 PKLRP30613 574 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 IDUAP35475 653 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 ANP32AP39687 249 aaKnown RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 RGS7P49802 495 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 MTTPP55157 894 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 CDK3Q00526 305 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 SNTB2Q13425 540 aaKnown RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 IDI1Q13907 227 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 LRRC38Q5VT99 294 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 WBP2NLQ6ICG8 309 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 SULT1C3Q6IMI6 304 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 FIGLAQ6QHK4 219 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 TAS2R42Q7RTR8 314 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 GPR180Q86V85 440 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 BOLLQ8N9W6 283 aaKnown RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 ACTRT2Q8TDY3 377 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 SLC20A1Q8WUM9 679 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 RNF183Q96D59 192 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 TTC25Q96NG3 672 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 LMF1Q96S06 567 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 CCDC77Q9BR77 488 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 FAM213AQ9BRX8 229 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 POLR3CQ9BUI4 534 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF416Q9BWM5 594 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 NFKBIZQ9BYH8 718 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 TSPYL1Q9H0U9 437 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM245Q9H330 911 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 SEC61A2Q9H9S3 476 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 MAGEF1Q9HAY2 307 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 CPNE5Q9HCH3 593 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 KLC4Q9NSK0 619 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM184CQ9NVA4 438 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 DDX49Q9Y6V7 483 aaKnown RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 ZNF804BA4D1E1 1349 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 ASTN2O75129 1339 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-224ENST00000497488 WDR19Q8NEZ3 1342 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 DEPDC5O75140 1603 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 ANKRD30AQ9BXX3 1397 aa5.92□□□□□ -1.46
BRCA1-224ENST00000497488 NCAPD2Q15021 1401 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 RRBP1Q9P2E9 1410 aaKnown RBP5.91□□□□□ -1.46
BRCA1-224ENST00000497488 CEP152O94986 1710 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 FAM135AQ9P2D6 1515 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 ANKUB1A6NFN9 424 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 TMEM202A6NGA9 273 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 L7N2F9 121 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 MAGEB2O15479 319 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 MSI1O43347 362 aaKnown RBP5.91□□□□□ -1.46
BRCA1-224ENST00000497488 NEMFO60524 1076 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 RAD51DO75771 328 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 ACSL3O95573 720 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 PLGP00747 810 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-224ENST00000497488 EPB41P11171 864 aaKnown RBP5.91□□□□□ -1.46
BRCA1-224ENST00000497488 AKR1A1P14550 325 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 ENGP17813 658 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 CHRNA5P30532 468 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 AKT2P31751 481 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 ARHGAP25P42331 645 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 SCNN1GP51170 649 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 CACNA2D1P54289 1103 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 MECOMQ03112 1051 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 ARHGAP1Q07960 439 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 PPP1R8Q12972 351 aaKnown RBP5.91□□□□□ -1.46
BRCA1-224ENST00000497488 ITGADQ13349 1161 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 PRAMEF19Q5SWL8 479 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 CCNYL2Q5T2Q4 361 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 TSTD2Q5T7W7 516 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 LRIG3Q6UXM1 1119 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 DLEU7Q6UYE1 221 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 PHLDB2Q86SQ0 1253 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 CCDC190Q86UF4 302 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 GSPT2Q8IYD1 628 aaKnown RBP5.91□□□□□ -1.46
BRCA1-224ENST00000497488 CARFQ8N187 725 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 PARP16Q8N5Y8 322 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 RFKQ969G6 155 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 SLCO4A1Q96BD0 722 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 C16orf58Q96GQ5 468 aa5.91□□□□□ -1.46
BRCA1-224ENST00000497488 VCPIP1Q96JH7 1222 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms