RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 EGLN1Q9GZT9 426 aa3.85□□□□□ -1.79
TRIM4-205ENST00000496896 SLC38A7Q9NVC3 462 aa3.85□□□□□ -1.79
TRIM4-205ENST00000496896 ATP6V1DQ9Y5K8 247 aa3.85□□□□□ -1.79
TRIM4-205ENST00000496896 MYO5BQ9ULV0 1848 aa3.85□□□□□ -1.79
TRIM4-205ENST00000496896 DIP2AQ14689 1571 aa3.85□□□□□ -1.79
TRIM4-205ENST00000496896 RGPD1P0DJD0 1748 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 IGKV3D-15A0A087WSY6 115 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 F5H0A9 414 aaPredicted RBP3.84□□□□□ -1.79
TRIM4-205ENST00000496896 NR5A2O00482 541 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 CLIC2O15247 247 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 PLPP2O43688 288 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 GPR137BO60478 399 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 GPC4O75487 556 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 PLA2G4BP0C869 781 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 LIFP15018 202 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 ANXA7P20073 488 aaKnown RBP3.84□□□□□ -1.79
TRIM4-205ENST00000496896 MSH2P43246 934 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 MPP1Q00013 466 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 SPOCK1Q08629 439 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 MFAP5Q13361 173 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 CUL4AQ13619 759 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 ITGA9Q13797 1035 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 IDI1Q13907 227 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 ZSCAN23Q3MJ62 389 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 KIAA1644Q3SXP7 199 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 NDUFAF5Q5TEU4 345 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 CFAP77Q6ZQR2 320 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 PXKQ7Z7A4 578 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 TICAM1Q8IUC6 712 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 CEP97Q8IW35 865 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 HJURPQ8NCD3 748 aaPredicted RBP3.84□□□□□ -1.79
TRIM4-205ENST00000496896 ZNF485Q8NCK3 441 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 KCNG4Q8TDN1 519 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 HCAR2Q8TDS4 363 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 COG3Q96JB2 828 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 PRMT6Q96LA8 375 aaPredicted RBP3.84□□□□□ -1.79
TRIM4-205ENST00000496896 PRAM1Q96QH2 718 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 SLC22A12Q96S37 553 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 CDK19Q9BWU1 502 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 PANK2Q9BZ23 570 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 IRAK4Q9NWZ3 460 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 OGFRQ9NZT2 677 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 POLKQ9UBT6 870 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 TNNQ9UQP3 1299 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 KCNK7Q9Y2U2 307 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 PIAS3Q9Y6X2 628 aa3.84□□□□□ -1.79
TRIM4-205ENST00000496896 LRRC37A3O60309 1634 aa3.84□□□□□ -1.8
TRIM4-205ENST00000496896 USP54Q70EL1 1684 aa3.84□□□□□ -1.8
TRIM4-205ENST00000496896 RIMS1Q86UR5 1692 aaKnown RBP3.84□□□□□ -1.8
TRIM4-205ENST00000496896 TOPAZ1Q8N9V7 1692 aa3.84□□□□□ -1.8
TRIM4-205ENST00000496896 TUBGCP6Q96RT7 1819 aa3.84□□□□□ -1.8
TRIM4-205ENST00000496896 CFAP65Q6ZU64 1925 aaKnown RBP3.83□□□□□ -1.8
TRIM4-205ENST00000496896 A0A1B0GU03 582 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 J3KRW8 73 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 ZBTB43O43298 467 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 SCGB1D1O95968 90 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 GNAZP19086 355 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 NFKBIAP25963 317 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 ITGA3P26006 1051 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 MED22Q15528 200 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 KRT71Q3SY84 523 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 TMEM154Q6P9G4 183 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 SASS6Q6UVJ0 657 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 MYPOPQ86VE0 399 aaPredicted RBP3.83□□□□□ -1.8
TRIM4-205ENST00000496896 GSDMBQ8TAX9 411 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 SENP5Q96HI0 755 aaPredicted RBP3.83□□□□□ -1.8
TRIM4-205ENST00000496896 PGAM5Q96HS1 289 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 RAD21L1Q9H4I0 556 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 SH2D4AQ9H788 454 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 SETD4Q9NVD3 440 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 NENFQ9UMX5 172 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 TTC21AQ8NDW8 1320 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 OVOS2A0A0J9YW53 1432 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 RGS12O14924 1447 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 OVOS2Q6IE36 1432 aa3.83□□□□□ -1.8
TRIM4-205ENST00000496896 FMN2Q9NZ56 1722 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 NRXN3Q9Y4C0 1643 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 PTPRUQ92729 1446 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 KDRP35968 1356 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 MSH6P52701 1360 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 CCDC171Q6TFL3 1326 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 A0A087X0M5 115 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 TEX13DA0A0J9YY54 714 aaPredicted RBP3.82□□□□□ -1.8
TRIM4-205ENST00000496896 A0A1B0GX30 115 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 ANTXRLA6NF34 631 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 SLCO1B7G3V0H7 640 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 H3BQ06 376 aaPredicted RBP3.82□□□□□ -1.8
TRIM4-205ENST00000496896 J3QR06 171 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 SLC22A2O15244 555 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 RNASEH2AO75792 299 aaKnown RBP3.82□□□□□ -1.8
TRIM4-205ENST00000496896 CSPG5O95196 566 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 TBX18O95935 607 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 CLPTM1O96005 669 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 SRPRAP08240 638 aaKnown RBP3.82□□□□□ -1.8
TRIM4-205ENST00000496896 CD48P09326 243 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 MAN1A1P33908 653 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 MEP1AQ16819 746 aa3.82□□□□□ -1.8
TRIM4-205ENST00000496896 ASTE1Q2TB18 679 aaPredicted RBP3.82□□□□□ -1.8
TRIM4-205ENST00000496896 GKAP1Q5VSY0 366 aaPredicted RBP3.82□□□□□ -1.8
TRIM4-205ENST00000496896 MFSD6Q6ZSS7 791 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms