RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 RAB6BQ9NRW1 208 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 C1GALT1Q9NS00 363 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 KCND1Q9NSA2 647 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 RIMKLBQ9ULI2 386 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 ZNF148Q9UQR1 794 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 TCAF1Q9Y4C2 921 aa13.85□□□□□ -0.19
VTI1A-209ENST00000496445 HECTD1Q9ULT8 2610 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 SLC5A10A0PJK1 596 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 CDC14CA4D256 554 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 GOLGA6L6A8MZA4 724 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 E7EVH7 732 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 FTH1P02794 183 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 PVRP15151 417 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 ACADLP28330 430 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 LMAN1P49257 510 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 IL10RAQ13651 578 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 BRD3Q15059 726 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 RPS6KA1Q15418 735 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 KCTD19Q17RG1 926 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-209ENST00000496445 TMTC4Q5T4D3 741 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 AFTPHQ6ULP2 937 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 AMIGO1Q86WK6 493 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 OR8K5Q8NH50 307 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 OR1L3Q8NH93 324 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 LKAAEAR1Q8TD35 194 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 TRAPPC9Q96Q05 1148 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 TWSG1Q9GZX9 223 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 LATS2Q9NRM7 1088 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 ACTR10Q9NZ32 417 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 PAK5Q9P286 719 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 POLHQ9Y253 713 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 PCDHB3Q9Y5E6 796 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 PCSK5Q92824 1860 aa13.84□□□□□ -0.19
VTI1A-209ENST00000496445 TNRC6AQ8NDV7 1962 aaKnown RBP13.83□□□□□ -0.19
VTI1A-209ENST00000496445 C2orf74A8MZ97 194 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 TMEM150CB9EJG8 249 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 BHMG1C9JSJ3 638 aaPredicted RBP13.83□□□□□ -0.2
VTI1A-209ENST00000496445 QSOX1O00391 747 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 APRTP07741 180 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 OR56A5P0C7T3 313 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 MSL3P1P0C860 447 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 ADRA1DP25100 572 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 RPL22P35268 128 aaKnown RBP13.83□□□□□ -0.2
VTI1A-209ENST00000496445 RORAP35398 523 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 LCN10Q6JVE6 187 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 SPESP1Q6UW49 350 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 CCDC89Q8N998 374 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 OR4L1Q8NH43 312 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 FLVCR1-AS1Q8TAF5 88 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.83□□□□□ -0.2
VTI1A-209ENST00000496445 KLHL25Q9H0H3 589 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 EPN3Q9H201 632 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 CLMPQ9H6B4 373 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 LZTFL1Q9NQ48 299 aa13.83□□□□□ -0.2
VTI1A-209ENST00000496445 PTPN13Q12923 2485 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 PIPSLA2A3N6 862 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 K7EM74 188 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 RECKO95980 971 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 GAS8O95995 478 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 UGT2B7P16662 529 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 NR1D1P20393 614 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 PTPN4P29074 926 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 PEBP1P30086 187 aaKnown RBP13.82□□□□□ -0.2
VTI1A-209ENST00000496445 CSRP3P50461 194 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 PMS2P54278 862 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 TLE1Q04724 770 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 CCNG2Q16589 344 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 SYTL3Q4VX76 610 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 LACTB2Q53H82 288 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-209ENST00000496445 PLEKHS1Q5SXH7 462 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 LYPLAL1Q5VWZ2 237 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 IZUMO3Q5VZ72 239 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 ZNF449Q6P9G9 518 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 DRICH1Q6PGQ1 229 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-209ENST00000496445 FAM198BQ6UWH4 519 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 UNC5AQ6ZN44 842 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 ZNF662Q6ZS27 426 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 CDHR3Q6ZTQ4 885 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 LDB1Q86U70 411 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-209ENST00000496445 TRIM73Q86UV7 250 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 TBC1D21Q8IYX1 336 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 DSELQ8IZU8 1212 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 OR5K2Q8NHB8 316 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 MR1Q95460 341 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 SGSM3Q96HU1 749 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 LRFN5Q96NI6 719 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 GPR87Q9BY21 358 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 CHST8Q9H2A9 424 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 FANCEQ9HB96 536 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 EIF2B3Q9NR50 452 aaKnown RBP13.82□□□□□ -0.2
VTI1A-209ENST00000496445 CHRAC1Q9NRG0 131 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 PCMTD2Q9NV79 361 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 SPHK1Q9NYA1 384 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 MARCH4Q9P2E8 410 aaPredicted RBP13.82□□□□□ -0.2
VTI1A-209ENST00000496445 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 CDYLQ9Y232 598 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 ASF1AQ9Y294 204 aa13.82□□□□□ -0.2
VTI1A-209ENST00000496445 TP53TG5Q9Y2B4 290 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms