RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ASIC5Q9NY37 505 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 PKD2L2Q9NZM6 624 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 THEGQ9P2T0 379 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 OAZ3Q9UMX2 235 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 IGLV3-16A0A075B6K0 115 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CCDC160A6NGH7 325 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 NEDD8-MDP1E9PL57 170 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 MANBAO00462 879 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 TULP3O75386 442 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 FGF19O95750 216 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 TIMP1P01033 207 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PABPC1P11940 636 aaKnown RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 LHCGRP22888 699 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 DDX6P26196 483 aaKnown RBP eCLIP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CCR7P32248 378 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 GGT5P36269 586 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 RECQLP46063 649 aaPredicted RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 HNMTP50135 292 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 DGKQP52824 942 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 MERTKQ12866 999 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PTGR1Q14914 329 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 MAPKAPK3Q16644 382 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CWF19L1Q69YN2 538 aaKnown RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 UBE2R2Q712K3 238 aaPredicted RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 LRRC70Q7Z2Q7 622 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SPRED1Q7Z699 444 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 EPHX4Q8IUS5 362 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 RGL4Q8IZJ4 473 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 METTL25Q8N6Q8 603 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 TRIML2Q8N7C3 387 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SKA2Q8WVK7 121 aaPredicted RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 USP7Q93009 1102 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 BIRC7Q96CA5 298 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SH3GL1Q99961 368 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 ADI1Q9BV57 179 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CAAP1Q9H8G2 361 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 BRD9Q9H8M2 597 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PARVBQ9HBI1 364 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 ZFP14Q9HCL3 533 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 DMTF1Q9Y222 760 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PLXNB3Q9ULL4 1909 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CFAP99D6REC4 459 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 H3BNH8 94 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PDLIM1O00151 329 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 KPNA5O15131 536 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CCL16O15467 120 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 RSL1D1O76021 490 aaKnown RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 OR6B1O95007 311 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 LDLRP01130 860 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CYP2A6P11509 494 aaPredicted RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CDH1P12830 882 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PCSK2P16519 638 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 ZNF30P17039 623 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 HRH2P25021 359 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 NFKBIAP25963 317 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SOX11P35716 441 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SPINT3P49223 89 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 MTPNP58546 118 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 B4GALNT1Q00973 533 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 HMGCS1Q01581 520 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 HSPA14Q0VDF9 509 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SP140Q13342 867 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 DYNC1I2Q13409 638 aaKnown RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 KIAA0040Q15053 153 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 FAM174BQ3ZCQ3 159 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 GDPD4Q6W3E5 623 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 MBOAT1Q6ZNC8 495 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 RBM44Q6ZP01 1051 aaKnown RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 FAM9CQ8IZT9 166 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 LIX1Q8N485 282 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 FAM47BQ8NA70 645 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 HM13Q8TCT9 377 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 VOPP1Q96AW1 172 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SEPHS2Q99611 448 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 BBS2Q9BXC9 721 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SLC12A9Q9BXP2 914 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PIF1Q9H611 641 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CLK4Q9HAZ1 481 aaKnown RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 CD320Q9NPF0 282 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 FARSBQ9NSD9 589 aaKnown RBP10.84□□□□□ -0.67
CMSS1-208ENST00000496116 C1orf109Q9NX04 203 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 B4GALT6Q9UBX8 382 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SNX6Q9UNH7 406 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 SLC8A2Q9UPR5 921 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 PDE10AQ9Y233 779 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
CMSS1-208ENST00000496116 MYOCOSA0A1B0GUC4 107 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 SLC16A5O15375 505 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 NUAK1O60285 661 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 PGRP06401 933 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 ANXA6P08133 673 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 C1SP09871 688 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 MPC1LP0DKB6 136 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 ATP1B2P14415 290 aaPredicted RBP10.83□□□□□ -0.68
CMSS1-208ENST00000496116 CYP2A7P20853 494 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 AOAHP28039 575 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 OR4D2P58180 307 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 TUBA4AP68366 448 aa10.83□□□□□ -0.68
CMSS1-208ENST00000496116 DMC1Q14565 340 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms