RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 INPP5DQ92835 1189 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 ELMO2Q96JJ3 720 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 OLFM1Q99784 485 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 TSPYL1Q9H0U9 437 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 TRIT1Q9H3H1 467 aaKnown RBP18.91■□□□□ 0.62
HDAC4-212ENST00000495497 ANKZF1Q9H8Y5 726 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 NSMCE4AQ9NXX6 385 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 TRMT6Q9UJA5 497 aaKnown RBP18.91■□□□□ 0.62
HDAC4-212ENST00000495497 MSRB2Q9Y3D2 182 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 PTPRBP23467 1997 aa18.91■□□□□ 0.62
HDAC4-212ENST00000495497 PMS2P1A4D2B8 440 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 OR6C74A6NCV1 312 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 A8MU76 341 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 ACSL3O95573 720 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 STX2P32856 288 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 BDKRB1P46663 353 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 PPP1CAP62136 330 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 SHC2P98077 582 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 ZFP36L1Q07352 338 aaKnown RBP18.9■□□□□ 0.62
HDAC4-212ENST00000495497 PHF19Q5T6S3 580 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 FAM45BPQ6NSW5 357 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 TMEM71Q6P5X7 295 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 TBC1D21Q8IYX1 336 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 LMNTD1Q8N9Z9 388 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 OR5K2Q8NHB8 316 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 FAM45AQ8TCE6 357 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 LCN9Q8WX39 176 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 MRRFQ96E11 262 aaKnown RBP18.9■□□□□ 0.62
HDAC4-212ENST00000495497 CCDC74BQ96LY2 380 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 MCMBPQ9BTE3 642 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 TAS2R13Q9NYV9 303 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.9■□□□□ 0.62
HDAC4-212ENST00000495497 MTO1Q9Y2Z2 717 aaKnown RBP18.9■□□□□ 0.62
HDAC4-212ENST00000495497 VWA7Q9Y334 891 aa18.9■□□□□ 0.62
HDAC4-212ENST00000495497 V9GYY5 206 aaPredicted RBP18.9■□□□□ 0.62
HDAC4-212ENST00000495497 FAM95CA0A1B0GW59 222 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 A0A1W2PNU3 283 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-212ENST00000495497 KRT87PA6NCN2 255 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 CAPN5O15484 640 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-212ENST00000495497 SPAG6O75602 509 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 FDXRP22570 491 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 CAPZBP47756 277 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 LIMK2P53671 638 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 TTLL9Q3SXZ7 439 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 CCSMST1Q4G0I0 132 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 WDR74Q6RFH5 385 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-212ENST00000495497 PAQR3Q6TCH7 311 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 UNC5DQ6UXZ4 953 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 OR4D9Q8NGE8 314 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 UHMK1Q8TAS1 419 aaKnown RBP18.89■□□□□ 0.61
HDAC4-212ENST00000495497 TMEM74Q96NL1 305 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 TGM7Q96PF1 710 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 RHOJQ9H4E5 214 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 EPB41L1Q9H4G0 881 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 KLHL42Q9P2K6 505 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 CORO1CQ9ULV4 474 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-212ENST00000495497 ICKQ9UPZ9 632 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 NCOR2Q9Y618 2525 aa18.89■□□□□ 0.61
HDAC4-212ENST00000495497 BTN3A3O00478 584 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 KIF1CO43896 1103 aaKnown RBP18.88■□□□□ 0.61
HDAC4-212ENST00000495497 C1orf105O95561 183 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 POLR2CP19387 275 aaPredicted RBP18.88■□□□□ 0.61
HDAC4-212ENST00000495497 ATP5DP30049 168 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 PHBP35232 272 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 GRB7Q14451 532 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 ZNF460Q14592 562 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 CLPPQ16740 277 aaPredicted RBP18.88■□□□□ 0.61
HDAC4-212ENST00000495497 UGT3A1Q6NUS8 523 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 IRGCQ6NXR0 463 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 FOXR1Q6PIV2 292 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 CYHR1Q6ZMK1 362 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 PIWIL4Q7Z3Z4 852 aaKnown RBP18.88■□□□□ 0.61
HDAC4-212ENST00000495497 EEF1AKMT1Q8WVE0 214 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 VPS39Q96JC1 886 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 CPNE1Q99829 537 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 SRMSQ9H3Y6 488 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 TFB2MQ9H5Q4 396 aaKnown RBP18.88■□□□□ 0.61
HDAC4-212ENST00000495497 HRASLS2Q9NWW9 162 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 TXNDC16Q9P2K2 825 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 POLG2Q9UHN1 485 aa18.88■□□□□ 0.61
HDAC4-212ENST00000495497 OR5K3A6NET4 321 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 TRABD2BA6NFA1 517 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 MATN4O95460 622 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 THRAP10827 490 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 CCKBRP32239 447 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 GP5P40197 560 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 PDAP1Q13442 181 aaKnown RBP18.87■□□□□ 0.61
HDAC4-212ENST00000495497 SLMAPQ14BN4 828 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 C16orf72Q14CZ0 275 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 C3orf38Q5JPI3 329 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 TMEM207Q6UWW9 146 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 FAM92BQ6ZTR7 304 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 AMIGO1Q86WK6 493 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 PLXDC1Q8IUK5 500 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 FOPNLQ96NB1 174 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 IL17FQ96PD4 163 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 RBBP8Q99708 897 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 DPYSL5Q9BPU6 564 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 CAB39LQ9H9S4 337 aa18.87■□□□□ 0.61
HDAC4-212ENST00000495497 SATB2Q9UPW6 733 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms