RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 RSC1A1Q92681 617 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CXorf40BQ96DE9 158 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CCDC74BQ96LY2 380 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 C12orf66Q96MD2 445 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 SLC46A1Q96NT5 459 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 BIRC8Q96P09 236 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 TTC1Q99614 292 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CARD6Q9BX69 1037 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 TWSG1Q9GZX9 223 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 RAB33BQ9H082 229 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 KIR3DX1Q9H7L2 352 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 VPS37BQ9H9H4 285 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 EPB41L5Q9HCM4 733 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 IMP3Q9NV31 184 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CUEDC1Q9NWM3 386 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 IL1RAPL1Q9NZN1 696 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 SAMD15Q9P1V8 674 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 EPHA6Q9UF33 1036 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 FOXD3Q9UJU5 478 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 CFAP20Q9Y6A4 193 aaKnown RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 RPS6KL1Q9Y6S9 549 aa8.55□□□□□ -1.04
ITGB1-217ENST00000494395 KMT2BQ9UMN6 2715 aaPredicted RBP8.55□□□□□ -1.04
ITGB1-217ENST00000494395 ZZEF1O43149 2961 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 SDK2Q58EX2 2172 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 SRRM3A6NNA2 597 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-217ENST00000494395 IQCF5A8MTL0 148 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 E7ESA3 106 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 EIF1AYO14602 144 aaKnown RBP8.54□□□□□ -1.04
ITGB1-217ENST00000494395 RAD51CO43502 376 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 GPC4O75487 556 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 TNFRSF21O75509 655 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 UBXN7O94888 489 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 POLBP06746 335 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ITGA2BP08514 1039 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ANKRD34CP0C6C1 535 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 SLC35G4P0C7Q5 338 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 OR56A5P0C7T3 313 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 PAMP19021 973 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ITIH1P19827 911 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 AOAHP28039 575 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 PPARGP37231 505 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ETV5P41161 510 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 CAPZBP47756 277 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 PREPP48147 710 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ITGA8P53708 1063 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 GFERP55789 205 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ERVPABLB-1P60509 514 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 MRPS25P82663 173 aaKnown RBP8.54□□□□□ -1.04
ITGB1-217ENST00000494395 BIRC2Q13490 618 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 GBX1Q14549 363 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 CRYMQ14894 314 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ZNF789Q5FWF6 425 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 STEAP4Q687X5 459 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 DUPD1Q68J44 220 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 MRNIPQ6NTE8 343 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 NEPROQ6NW34 567 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 CASC4Q6P4E1 433 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 NAPRTQ6XQN6 538 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 RAB11FIP2Q7L804 512 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 PDZD3Q86UT5 571 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 LRRC6Q86X45 466 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 CILP2Q8IUL8 1156 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 VRK3Q8IV63 474 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 UNC5BQ8IZJ1 945 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 BMPERQ8N8U9 685 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 RCBTB1Q8NDN9 531 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 NCSTNQ92542 709 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 TMEM159Q96B96 161 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 STAMBPL1Q96FJ0 436 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 SNF8Q96H20 258 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ZNF578Q96N58 590 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-217ENST00000494395 PWWP2AQ96N64 755 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 TCF12Q99081 682 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 EBNA1BP2Q99848 306 aaKnown RBP8.54□□□□□ -1.04
ITGB1-217ENST00000494395 STRADBQ9C0K7 418 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 LATS2Q9NRM7 1088 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 GRHL1Q9NZI5 618 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 SEMA5BQ9P283 1151 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 SLC24A2Q9UI40 661 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 CDC23Q9UJX2 597 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ANAPC5Q9UJX4 755 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 ACSL6Q9UKU0 697 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 MED16Q9Y2X0 877 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 LOXL2Q9Y4K0 774 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 TEX264Q9Y6I9 313 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 FAM169AQ9Y6X4 670 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 CELSR3Q9NYQ7 3312 aa8.54□□□□□ -1.04
ITGB1-217ENST00000494395 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 EFCAB8A8MWE9 144 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 EFSO43281 561 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 SLCO2B1O94956 709 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 F7P08709 466 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 TPBGLP0DKB5 382 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 CCL4P13236 92 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 HGFP14210 728 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 SNRPBP14678 240 aaKnown RBP8.53□□□□□ -1.04
ITGB1-217ENST00000494395 TYRP1P17643 537 aa8.53□□□□□ -1.04
ITGB1-217ENST00000494395 PGAM1P18669 254 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms