RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 OR5AR1Q8NGP9 310 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 OR5K2Q8NHB8 316 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 IFI44Q8TCB0 444 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CCDC74AQ96AQ1 378 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 SLC38A3Q99624 504 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 HGH1Q9BTY7 390 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 ROPN1BQ9BZX4 212 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 ROPN1Q9HAT0 212 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 SLC40A1Q9NP59 571 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CTNNAL1Q9UBT7 734 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TDRKHQ9Y2W6 561 aaKnown RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 ACOT9Q9Y305 439 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 U3KQA8 63 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 A0A087X1B8 175 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 PRAMEF33A0A0G2JMD5 474 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 MATN4O95460 622 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CATP04040 527 aaKnown RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 ALDOAP04075 364 aaKnown RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CCDC166P0CW27 439 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 KRT15P19012 456 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 ACP1P24666 158 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CCNFP41002 786 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 PRKG2Q13237 762 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 GPR18Q14330 331 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CCDC157Q569K6 752 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TMEM207Q6UWW9 146 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 TMEM26Q6ZUK4 368 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 CCDC91Q7Z6B0 441 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 ZNF761Q86XN6 746 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 DCUN1D3Q8IWE4 304 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 RIBC1Q8N443 379 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-223ENST00000494123 MAGEC3Q8TD91 643 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 VPS11Q9H270 941 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 POLG2Q9UHN1 485 aa14.19□□□□□ -0.14
BRCA1-223ENST00000494123 PIEZO1Q92508 2521 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 A0A096LPK6 155 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 PABPN1LA6NDY0 278 aaKnown RBP14.18□□□□□ -0.14
BRCA1-223ENST00000494123 ZBTB14O43829 449 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 TSPAN12O95859 305 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 MPOP05164 745 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 C2P06681 752 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 SLC35E2BP0CK96 405 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 PNLIPP16233 465 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 MAP4P27816 1152 aaKnown RBP14.18□□□□□ -0.14
BRCA1-223ENST00000494123 ALDH4A1P30038 563 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 BDKRB1P46663 353 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 CSHL1Q14406 222 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 RASA2Q15283 850 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 KRT71Q3SY84 523 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 FBXO38Q6PIJ6 1188 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 CYHR1Q6ZMK1 362 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 UBE2R2Q712K3 238 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-223ENST00000494123 Q8N9G6 341 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-223ENST00000494123 ANKRD49Q8WVL7 239 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 ZFPM2Q8WW38 1151 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 PDLIM5Q96HC4 596 aaKnown RBP14.18□□□□□ -0.14
BRCA1-223ENST00000494123 RTKNQ9BST9 563 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 ZMYND15Q9H091 742 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 KIR3DX1Q9H7L2 352 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 UCK1Q9HA47 277 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 KCNK4Q9NYG8 393 aa14.18□□□□□ -0.14
BRCA1-223ENST00000494123 BTN3A1O00481 513 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 TM4SF5O14894 197 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 PSIP1O75475 530 aaKnown RBP14.17□□□□□ -0.14
BRCA1-223ENST00000494123 C1orf105O95561 183 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 MT-ND3P03897 115 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 GP1BAP07359 652 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 C8GP07360 202 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 H2AFXP16104 143 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-223ENST00000494123 CYP2A7P20853 494 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 GPR3P46089 330 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 ACADVLP49748 655 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 NOVA1P51513 510 aaKnown RBP14.17□□□□□ -0.14
BRCA1-223ENST00000494123 SP140Q13342 867 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 PPM1JQ5JR12 505 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 PERM1Q5SV97 790 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 ZNF438Q7Z4V0 828 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 SPATA6LQ8N4H0 392 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 ASB11Q8WXH4 323 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 ISL2Q96A47 359 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 RAD51AP1Q96B01 352 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 AHCYL2Q96HN2 611 aaKnown RBP14.17□□□□□ -0.14
BRCA1-223ENST00000494123 CABS1Q96KC9 395 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 TSNARE1Q96NA8 513 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 ZIM3Q96PE6 472 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 RUFY1Q96T51 708 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 CCDC3Q9BQI4 270 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 UNKQ9C0B0 810 aaKnown RBP14.17□□□□□ -0.14
BRCA1-223ENST00000494123 DERL2Q9GZP9 239 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 SYNDIG1Q9H7V2 258 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 CEP250Q9BV73 2442 aa14.17□□□□□ -0.14
BRCA1-223ENST00000494123 LILRA5A6NI73 299 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 RFPL3O75679 317 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 WISP3O95389 354 aaPredicted RBP14.16□□□□□ -0.14
BRCA1-223ENST00000494123 SYF2O95926 243 aaKnown RBP14.16□□□□□ -0.14
BRCA1-223ENST00000494123 LTA4HP09960 611 aaKnown RBP14.16□□□□□ -0.14
BRCA1-223ENST00000494123 CEACAM1P13688 526 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 KCNA4P22459 653 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 SLC26A3P40879 764 aa14.16□□□□□ -0.14
BRCA1-223ENST00000494123 EPHA4P54764 986 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms