RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CAPZA3Q96KX2 299 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 KRT12Q99456 494 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 P2RY13Q9BPV8 354 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 TINAGL1Q9GZM7 467 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-222ENST00000493919 SIK2Q9H0K1 926 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 TRIT1Q9H3H1 467 aaKnown RBP11.4□□□□□ -0.58
BRCA1-222ENST00000493919 WDCPQ9H6R7 721 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 CAB39LQ9H9S4 337 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 MRPL47Q9HD33 250 aaKnown RBP11.4□□□□□ -0.58
BRCA1-222ENST00000493919 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 TMPRSS4Q9NRS4 437 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 RBM12Q9NTZ6 932 aaKnown RBP11.4□□□□□ -0.58
BRCA1-222ENST00000493919 DNAJC17Q9NVM6 304 aaKnown RBP11.4□□□□□ -0.58
BRCA1-222ENST00000493919 PACSIN2Q9UNF0 486 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-222ENST00000493919 KIAA1549LQ6ZVL6 1849 aa11.4□□□□□ -0.58
BRCA1-222ENST00000493919 SOWAHDA6NJG2 315 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SHISA7A6NL88 538 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 FAM170BA6NMN3 283 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 PRR33A8MZF0 331 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 MEN1O00255 615 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SYNCRIPO60506 623 aaKnown RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 CCNT2O60583 730 aaKnown RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 PAGE1O75459 146 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 HBQ1P09105 142 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 GNSP15586 552 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 RAB3AP20336 220 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 FECHP22830 423 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 CHMP24386 653 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SPAM1P38567 509 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 OPRD1P41143 372 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SLC6A11P48066 632 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SGSHP51688 502 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SLC7A2P52569 658 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF143P52747 638 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 OGDHQ02218 1023 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 TOP3AQ13472 1001 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 EIF4EBP2Q13542 120 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 TRIM25Q14258 630 aaKnown RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 RETSATQ6NUM9 610 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SCYL2Q6P3W7 929 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 C5orf46Q6UWT4 87 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 IZUMO2Q6UXV1 221 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SPATC1Q76KD6 591 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 JAMLQ86YT9 394 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 LGI2Q8N0V4 545 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 OR4D10Q8NGI6 311 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 OR5H6Q8NGV6 325 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 KLHL6Q8WZ60 621 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF566Q969W8 418 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF845Q96IR2 970 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF696Q9H7X3 374 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SACM1LQ9NTJ5 587 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 KLHL9Q9P2J3 617 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 EIF3LQ9Y262 564 aaKnown RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SIT1Q9Y3P8 196 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 A0A1W2PRG6 482 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF839A8K0R7 811 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 MEI4A8MW99 385 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 F5H5T6 163 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 TRIM24O15164 1050 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 TP73O15350 636 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 TXNL1O43396 289 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 GPR37L1O60883 481 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 TULP3O75386 442 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 GOSR1O95249 250 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 H2AFZP0C0S5 128 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 AOC1P19801 751 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 TACR2P21452 398 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 PDHA2P29803 388 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 CXCR3P49682 368 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 CDK10Q15131 360 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 MPPE1Q53F39 396 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 MS4A13Q5J8X5 152 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ASTLQ6HA08 431 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 SLC16A12Q6ZSM3 486 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 H2AFVQ71UI9 128 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 STRADAQ7RTN6 431 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 VSIG1Q86XK7 387 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 FAM217AQ8IXS0 508 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 CCDC105Q8IYK2 499 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 CFAP52Q8N1V2 620 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 FNDC5Q8NAU1 212 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 FAM216AQ8WUB2 273 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 P2RY11Q96G91 374 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 FBRSL1Q9HCM7 1045 aaKnown RBP11.39□□□□□ -0.59
BRCA1-222ENST00000493919 PRDM8Q9NQV8 689 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ANLNQ9NQW6 1124 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ARHGEF4Q9NR80 690 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 UFSP2Q9NUQ7 469 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 CMTM6Q9NX76 183 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 MARK1Q9P0L2 795 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 DEC1Q9P2X7 70 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 ANAPC7Q9UJX3 599 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 STOML2Q9UJZ1 356 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 NENFQ9UMX5 172 aa11.39□□□□□ -0.59
BRCA1-222ENST00000493919 PDE2AO00408 941 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-222ENST00000493919 CACNG3O60359 315 aa11.38□□□□□ -0.59
BRCA1-222ENST00000493919 TBL1XO60907 577 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms