RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ASB11Q8WXH4 323 aa18.91■□□□□ 0.62
USP39-218ENST00000493829 TFGQ92734 400 aaPredicted RBP18.91■□□□□ 0.62
USP39-218ENST00000493829 HGH1Q9BTY7 390 aa18.91■□□□□ 0.62
USP39-218ENST00000493829 NUSAP1Q9BXS6 441 aaKnown RBP18.91■□□□□ 0.62
USP39-218ENST00000493829 NKIRAS1Q9NYS0 192 aa18.91■□□□□ 0.62
USP39-218ENST00000493829 PI4KAP42356 2102 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 ARHGAP33O14559 1287 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 KHNYNO15037 678 aaKnown RBP18.9■□□□□ 0.62
USP39-218ENST00000493829 KERAO60938 352 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 ZWINTO95229 277 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 C8GP07360 202 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 SBK3P0C264 359 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 F3P13726 295 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 PRKG2Q13237 762 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 RPE65Q16518 533 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 ZNF423Q2M1K9 1284 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 CAPRIN2Q6IMN6 1127 aaKnown RBP18.9■□□□□ 0.62
USP39-218ENST00000493829 GKN2Q86XP6 184 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 GPSM1Q86YR5 675 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 ATOH8Q96SQ7 321 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 MRPL57Q9BQC6 102 aaKnown RBP18.9■□□□□ 0.62
USP39-218ENST00000493829 PLAGL1Q9UM63 463 aa18.9■□□□□ 0.62
USP39-218ENST00000493829 TDRKHQ9Y2W6 561 aaKnown RBP18.9■□□□□ 0.62
USP39-218ENST00000493829 A0A1B0GTQ1 180 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 A6NCN8 305 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 NEMP2A6NFY4 417 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 YY2O15391 372 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 PSIP1O75475 530 aaKnown RBP18.89■□□□□ 0.61
USP39-218ENST00000493829 CATP04040 527 aaKnown RBP18.89■□□□□ 0.61
USP39-218ENST00000493829 ANXA6P08133 673 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 RBP1P09455 135 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 ENGP17813 658 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 MAP4P27816 1152 aaKnown RBP18.89■□□□□ 0.61
USP39-218ENST00000493829 EPHA8P29322 1005 aaPredicted RBP18.89■□□□□ 0.61
USP39-218ENST00000493829 SP140Q13342 867 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 KRT33BQ14525 404 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 PPP1R3AQ16821 1122 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 CCDC153Q494R4 210 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 FBXO48Q5FWF7 155 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 KNL1Q8NG31 2342 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 STAG3L4Q8TBR4 150 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 ZDHHC1Q8WTX9 485 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 FERD3LQ96RJ6 166 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 MECRQ9BV79 373 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 CD274Q9NZQ7 290 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 PDE10AQ9Y233 779 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 CACNA1EQ15878 2313 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 WDR91A4D1P6 747 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 PABPN1LA6NDY0 278 aaKnown RBP18.89■□□□□ 0.61
USP39-218ENST00000493829 TM9SF1O15321 606 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 C1orf105O95561 183 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 SYPP08247 313 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 MTHFD1P11586 935 aaKnown RBP18.89■□□□□ 0.61
USP39-218ENST00000493829 CHN1P15882 459 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 CYP2A7P20853 494 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 HHATQ5VTY9 493 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 IL27RAQ6UWB1 636 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 UNC5DQ6UXZ4 953 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 JPH3Q8WXH2 748 aaPredicted RBP18.89■□□□□ 0.61
USP39-218ENST00000493829 CXorf40BQ96DE9 158 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 EGFL8Q99944 293 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 OARD1Q9Y530 152 aa18.89■□□□□ 0.61
USP39-218ENST00000493829 CACNA1HO95180 2353 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 LMO7DNF2Z398 122 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 GFYI3L273 518 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 CER1O95813 267 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 RETP07949 1114 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 MYL2P10916 166 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 GFAPP14136 432 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 SF3A2Q15428 464 aaKnown RBP18.88■□□□□ 0.61
USP39-218ENST00000493829 PLA2G2CQ5R387 149 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 ABRAXAS1Q6UWZ7 409 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 TAX1BP1Q86VP1 789 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 NAGSQ8N159 534 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 SLC25A45Q8N413 288 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 TMEM151AQ8N4L1 468 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 RHEBL1Q8TAI7 183 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 FAM76AQ8TAV0 307 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 NRTNQ99748 197 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 SLC12A9Q9BXP2 914 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 TRIT1Q9H3H1 467 aaKnown RBP18.88■□□□□ 0.61
USP39-218ENST00000493829 PARVBQ9HBI1 364 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 ACSS2Q9NR19 701 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 ARL15Q9NXU5 204 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 ZNF624Q9P2J8 865 aaPredicted RBP18.88■□□□□ 0.61
USP39-218ENST00000493829 PCOLCE2Q9UKZ9 415 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 DNAH14Q0VDD8 3507 aa18.88■□□□□ 0.61
USP39-218ENST00000493829 S100BP04271 92 aaPredicted RBP18.87■□□□□ 0.61
USP39-218ENST00000493829 KCNA4P22459 653 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 ETV4P43268 484 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 RXRGP48443 463 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 RPIAP49247 311 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 CCT8P50990 548 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 ATXN3P54252 364 aaPredicted RBP18.87■□□□□ 0.61
USP39-218ENST00000493829 MAZP56270 477 aaKnown RBP18.87■□□□□ 0.61
USP39-218ENST00000493829 WDR4P57081 412 aaKnown RBP18.87■□□□□ 0.61
USP39-218ENST00000493829 SPEM2Q0P670 501 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 PCLAFQ15004 111 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 TGFBIQ15582 683 aa18.87■□□□□ 0.61
USP39-218ENST00000493829 C18orf21Q32NC0 220 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms