RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TFGQ92734 400 aaPredicted RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 SH3KBP1Q96B97 665 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 CXorf40BQ96DE9 158 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 IQCGQ9H095 443 aaKnown RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 TRIT1Q9H3H1 467 aaKnown RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 TFB2MQ9H5Q4 396 aaKnown RBP12.14□□□□□ -0.47
SNX17-208ENST00000493711 MED4Q9NPJ6 270 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 PRDM8Q9NQV8 689 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 PCMTD2Q9NV79 361 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 ZNF446Q9NWS9 450 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 TMCO1Q9UM00 188 aa12.14□□□□□ -0.47
SNX17-208ENST00000493711 GVINP1Q7Z2Y8 2422 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 A0A1W2PPM1 405 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 SYCE1LA8MT33 242 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 GFYI3L273 518 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 ZW10O43264 779 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 SDC3O75056 442 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 PSIP1O75475 530 aaKnown RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 HIST1H2AGP0C0S8 130 aaPredicted RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 MTHFD1P11586 935 aaKnown RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 HIST1H2ADP20671 130 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 RPL10P27635 214 aaKnown RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 MAP4P27816 1152 aaKnown RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 HSD17B2P37059 387 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 GRK6P43250 576 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 AP1S2P56377 157 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 SPEM2Q0P670 501 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 ABRQ12979 859 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 BNIP3Q12983 259 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 BIRC2Q13490 618 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 CSHL1Q14406 222 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 ZNF460Q14592 562 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 CCDC6Q16204 474 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 RPE65Q16518 533 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 CDKL4Q5MAI5 379 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 ZCCHC8Q6NZY4 707 aaKnown RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 TMEM207Q6UWW9 146 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 NAPRTQ6XQN6 538 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 SH2D5Q6ZV89 423 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 KANSL1Q7Z3B3 1105 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 VRK3Q8IV63 474 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 DCUN1D3Q8IWE4 304 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 TRIM48Q8IWZ4 208 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 SLC25A45Q8N413 288 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 SFRP1Q8N474 314 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 RAB42Q8N4Z0 105 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 LILRA3Q8N6C8 439 aaPredicted RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 FAM181AQ8N9Y4 354 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 OR4C6Q8NH72 309 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 MAPK15Q8TD08 544 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 ANKRD49Q8WVL7 239 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 KIAA1191Q96A73 305 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 HIST1H2AHQ96KK5 128 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 ATP6V1G3Q96LB4 118 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 RMDN2Q96LZ7 410 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 C12orf66Q96MD2 445 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 HIST1H2AJQ99878 128 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 H2AFJQ9BTM1 129 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 EDEM2Q9BV94 578 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 SLC12A9Q9BXP2 914 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 PARVBQ9HBI1 364 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 TMEM9BQ9NQ34 198 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 POT1Q9NUX5 634 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 MID2Q9UJV3 735 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 PSMD13Q9UNM6 376 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
SNX17-208ENST00000493711 ASF1AQ9Y294 204 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 ST14Q9Y5Y6 855 aa12.13□□□□□ -0.47
SNX17-208ENST00000493711 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 ZNF292O60281 2723 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 ZNF839A8K0R7 811 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 B4DGG1 531 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 BTN3A1O00481 513 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 FLRT2O43155 660 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 SASH3O75995 380 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 VIPP01282 170 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 BRAFP15056 766 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 CD1DP15813 335 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 DUSP3P51452 185 aaPredicted RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 DEFB133Q30KQ1 61 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 CCDC153Q494R4 210 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 AASDHQ4L235 1098 aaPredicted RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 TCEAL6Q6IPX3 200 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 XKR5Q6UX68 686 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 DBX2Q6ZNG2 339 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 PRR23CQ6ZRP0 262 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 FRA10AC1Q70Z53 315 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 UBE2R2Q712K3 238 aaPredicted RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 DGLUCYQ7Z3D6 616 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 PIWIL4Q7Z3Z4 852 aaKnown RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 C17orf82Q86X59 251 aaPredicted RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 RASGRP3Q8IV61 690 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 ABCA7Q8IZY2 2146 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 CENPLQ8N0S6 344 aaPredicted RBP12.12□□□□□ -0.47
SNX17-208ENST00000493711 ARL10Q8N8L6 244 aa12.12□□□□□ -0.47
SNX17-208ENST00000493711 BANPQ8N9N5 519 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms