RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 OVGP1Q12889 678 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 EIF2B5Q13144 721 aaKnown RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 LRP8Q14114 963 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 PTK2BQ14289 1009 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 FZD2Q14332 565 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 ZXDCQ2QGD7 858 aaPredicted RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 ZNF528Q3MIS6 628 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 SULT1C3Q6IMI6 304 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 TTC23LQ6PF05 361 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 TSSK4Q6SA08 328 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 ENPP7Q6UWV6 458 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 WASH2PQ6VEQ5 465 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 LONP2Q86WA8 852 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 DCP2Q8IU60 420 aaKnown RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 C1orf210Q8IVY1 113 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 TCAIMQ8N3R3 496 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 PRSS33Q8NF86 280 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 PPP1R14CQ8TAE6 165 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 ZNF473Q8WTR7 871 aaKnown RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 FBXL8Q96CD0 374 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 GRAMD1AQ96CP6 724 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 PHF21BQ96EK2 531 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 MOCOSQ96EN8 888 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 PITPNM3Q9BZ71 974 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 NSRP1Q9H0G5 558 aaKnown RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 CARS2Q9HA77 564 aaKnown RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 WASH6PQ9NQA3 447 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 TRNAU1APQ9NX07 287 aaKnown RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 CD274Q9NZQ7 290 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 KLQ9UEF7 1012 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 EIF2B4Q9UI10 523 aaKnown RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 PCTPQ9UKL6 214 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 FBXO4Q9UKT5 387 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.35□□□□□ -0.43
VPS52-220ENST00000493674 PLEKHM1Q9Y4G2 1056 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 ASB1Q9Y576 335 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
VPS52-220ENST00000493674 MYO15AQ9UKN7 3530 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 DMDP11532 3685 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 A6NCN8 305 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 LRRC14BA6NHZ5 514 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 E2F3O00716 465 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 LAMTOR5O43504 91 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 SNX3O60493 162 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 C1orf105O95561 183 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 CATP04040 527 aaKnown RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 CHRNGP07510 517 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 ALOX15P16050 662 aaPredicted RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 EEF1DP29692 281 aaKnown RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 CCR10P46092 362 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 SLC6A12P48065 614 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 RPIAP49247 311 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 ABRQ12979 859 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 GRB7Q14451 532 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 ANGPT1Q15389 498 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 ARL13AQ5H913 290 aaPredicted RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 MBOAT1Q6ZNC8 495 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 CHST15Q7LFX5 561 aaPredicted RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 RAB44Q7Z6P3 723 aaPredicted RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 C11orf74Q86VG3 221 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 BCAS4Q8TDM0 211 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 GAB3Q8WWW8 586 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 SNX19Q92543 992 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 TSACCQ96A04 125 aaPredicted RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 KLHDC7BQ96G42 594 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 TM9SF3Q9HD45 589 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 ACSS2Q9NR19 701 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 KLC4Q9NSK0 619 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 UTP6Q9NYH9 597 aaKnown RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 DNAJC16Q9Y2G8 782 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 RAP2CQ9Y3L5 183 aa12.34□□□□□ -0.43
VPS52-220ENST00000493674 TNPO3Q9Y5L0 923 aaKnown RBP12.34□□□□□ -0.43
VPS52-220ENST00000493674 NCF1BA6NI72 391 aaPredicted RBP12.33□□□□□ -0.44
VPS52-220ENST00000493674 NCF1CA8MVU1 366 aaPredicted RBP12.33□□□□□ -0.44
VPS52-220ENST00000493674 MEI4A8MW99 385 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 ZNF195O14628 629 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 SNX2O60749 519 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 RASGRP1O95267 797 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 S100BP04271 92 aaPredicted RBP12.33□□□□□ -0.44
VPS52-220ENST00000493674 ANXA5P08758 320 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 ERGP11308 486 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 NCF1P14598 390 aaPredicted RBP12.33□□□□□ -0.44
VPS52-220ENST00000493674 CD38P28907 300 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 BDKRB1P46663 353 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 HNMTP50135 292 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 TCF15Q12870 199 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 C18orf21Q32NC0 220 aaPredicted RBP12.33□□□□□ -0.44
VPS52-220ENST00000493674 CCSMST1Q4G0I0 132 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 PMS2CLQ68D20 193 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 ANKS6Q68DC2 871 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 ABRAXAS1Q6UWZ7 409 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 CPLX4Q7Z7G2 160 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 NRROSQ86YC3 692 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 CRLF3Q8IUI8 442 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 DEFB119Q8N690 84 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 CCNYL1Q8N7R7 359 aa12.33□□□□□ -0.44
VPS52-220ENST00000493674 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
VPS52-220ENST00000493674 MCOLN3Q8TDD5 553 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms