RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 EPS15L1Q9UBC2 864 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 SUN2Q9UH99 717 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 PCTPQ9UKL6 214 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 CLEC4EQ9ULY5 219 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 NDUFAF1Q9Y375 327 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 ANGPTL3Q9Y5C1 460 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 COPG1Q9Y678 874 aaKnown RBP9.85□□□□□ -0.83
PRPF3-206ENST00000493553 NUMBLQ9Y6R0 609 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 MTCL1Q9Y4B5 1905 aaKnown RBP9.85□□□□□ -0.83
PRPF3-206ENST00000493553 DNAH12Q6ZR08 3092 aa9.85□□□□□ -0.83
PRPF3-206ENST00000493553 DENND4CQ5VZ89 1909 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 NPEPPSL1A6NEC2 478 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 NPIPB15A6NHN6 443 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 CDC7O00311 574 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 GAPDHSO14556 408 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 NUAK1O60285 661 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 PEX11AO75192 247 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 WDR47O94967 919 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 TRIM16O95361 564 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 PSMG1O95456 288 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 NPPAP01160 153 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 CYP17A1P05093 508 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 HIST1H2AGP0C0S8 130 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 CISD3P0C7P0 127 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 FOSL1P15407 271 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 HIST1H2ADP20671 130 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 EIF2DP41214 584 aaKnown RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 KCNC1P48547 511 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 STK19P49842 368 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 AP1S2P56377 157 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 SLC34A1Q06495 639 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 ZNF33BQ06732 778 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 TBL3Q12788 808 aaKnown RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 KCNC3Q14003 757 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 CAMK1Q14012 370 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 FASTKQ14296 549 aaKnown RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 COL19A1Q14993 1142 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 TGFBIQ15582 683 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 RBBP7Q16576 425 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 SETMARQ53H47 684 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 CMPK2Q5EBM0 449 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 ICE2Q659A1 982 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 BNC2Q6ZN30 1099 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 PRR23BQ6ZRT6 265 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 LARP4Q71RC2 724 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 CPNE9Q8IYJ1 553 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 DEFB107AQ8IZN7 70 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 SHISA5Q8N114 240 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 MIER2Q8N344 545 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 TRPC4APQ8TEL6 797 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 TWIST2Q8WVJ9 160 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 ATL1Q8WXF7 558 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 DLG3Q92796 817 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 EXT2Q93063 718 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 RAB7BQ96AH8 199 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 PRR11Q96HE9 360 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 RSRC1Q96IZ7 334 aaKnown RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 ZNF514Q96K75 400 aaPredicted RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 HIST1H2AHQ96KK5 128 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 FRMD6Q96NE9 622 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 KLHL32Q96NJ5 620 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 CATSPER2Q96P56 530 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 VPS35Q96QK1 796 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 HIST1H2AJQ99878 128 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 H2AFJQ9BTM1 129 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 SLC29A3Q9BZD2 475 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 UNKQ9C0B0 810 aaKnown RBP9.84□□□□□ -0.83
PRPF3-206ENST00000493553 MCOLN1Q9GZU1 580 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 LINC00597Q9H2U6 94 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 EPHX3Q9H6B9 360 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 GID8Q9NWU2 228 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 B4GALT6Q9UBX8 382 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 SLCO3A1Q9UIG8 710 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 WNT6Q9Y6F9 365 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 OBSL1O75147 1896 aa9.84□□□□□ -0.83
PRPF3-206ENST00000493553 A0A088AWK7 358 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 LOC100653049A0A140TA62 436 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 KLHL33A6NCF5 533 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 FFAR2O15552 330 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 SKAP2O75563 359 aaPredicted RBP9.83□□□□□ -0.84
PRPF3-206ENST00000493553 KRT34O76011 436 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 MATN4O95460 622 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 CA3P07451 260 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 ANXA5P08758 320 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 ITGAXP20702 1163 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 CYP2A7P20853 494 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 VHLP40337 213 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 CPA2P48052 419 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 PSMD8P48556 350 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 CDKN1CP49918 316 aaPredicted RBP9.83□□□□□ -0.84
PRPF3-206ENST00000493553 NUDT2P50583 147 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 MTTPP55157 894 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 FOXM1Q08050 763 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 ELAVL3Q14576 367 aaKnown RBP9.83□□□□□ -0.84
PRPF3-206ENST00000493553 KPNB1Q14974 876 aaKnown RBP9.83□□□□□ -0.84
PRPF3-206ENST00000493553 UGT3A2Q3SY77 523 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 FAM46CQ5VWP2 391 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 ATG14Q6ZNE5 492 aa9.83□□□□□ -0.84
PRPF3-206ENST00000493553 TMEM126BQ8IUX1 230 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms