RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 WASHC5Q12768 1159 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 MESDQ14696 234 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 SPESP1Q6UW49 350 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 PPP1R32Q7Z5V6 425 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 C19orf47Q8N9M1 422 aaKnown RBP17.08■□□□□ 0.32
NUP50-218ENST00000493456 IPMKQ8NFU5 416 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 OR52E1Q8NGJ3 308 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 VAT1Q99536 393 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 FSD1LQ9BXM9 530 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 CHRNA10Q9GZZ6 450 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 KLHL25Q9H0H3 589 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 ASB8Q9H765 288 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 ACTR10Q9NZ32 417 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 KLHL8Q9P2G9 620 aaPredicted RBP17.08■□□□□ 0.32
NUP50-218ENST00000493456 CAPN11Q9UMQ6 739 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 OSGIN2Q9Y236 505 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 DCHS2Q6V1P9 2916 aa17.08■□□□□ 0.32
NUP50-218ENST00000493456 C2CD3Q4AC94 2353 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 DIDO1Q9BTC0 2240 aaKnown RBP17.07■□□□□ 0.32
NUP50-218ENST00000493456 CCDC66A2RUB6 948 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 C2orf81A6NN90 581 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 CFAP99D6REC4 459 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 LRRC38Q5VT99 294 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 C1orf189Q5VU69 101 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 B3GNTL1Q67FW5 361 aaPredicted RBP17.07■□□□□ 0.32
NUP50-218ENST00000493456 MRPL14Q6P1L8 145 aaKnown RBP17.07■□□□□ 0.32
NUP50-218ENST00000493456 IGFL2Q6UWQ7 119 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 ADGRF3Q8IZF5 1079 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 NAT14Q8WUY8 206 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 HEXDCQ8WVB3 486 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 ULK4Q96C45 1275 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 OXNAD1Q96HP4 312 aaPredicted RBP17.07■□□□□ 0.32
NUP50-218ENST00000493456 UNKQ9C0B0 810 aaKnown RBP17.07■□□□□ 0.32
NUP50-218ENST00000493456 OR52A5Q9H2C5 316 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 COG4Q9H9E3 785 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 VPS37BQ9H9H4 285 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 TXLNGQ9NUQ3 528 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 ARL5AQ9Y689 179 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 POLQO75417 2590 aa17.07■□□□□ 0.32
NUP50-218ENST00000493456 FER1L5A0AVI2 2057 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 A0A1B0GUH1 482 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 AGAP14A8MT82 685 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 ZSCAN9O15535 394 aaPredicted RBP17.06■□□□□ 0.32
NUP50-218ENST00000493456 ZG16O60844 167 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 UMODP07911 640 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 PBX1P40424 430 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 ARHGAP25P42331 645 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 TAF1AQ15573 450 aaPredicted RBP17.06■□□□□ 0.32
NUP50-218ENST00000493456 SP5Q6BEB4 398 aaPredicted RBP17.06■□□□□ 0.32
NUP50-218ENST00000493456 TLDC1Q6P9B6 456 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 ZNF449Q6P9G9 518 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 MCEMP1Q8IX19 187 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 GRHL3Q8TE85 626 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 FAR1Q8WVX9 515 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 GBP4Q96PP9 640 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 PACSIN1Q9BY11 444 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 DEF6Q9H4E7 631 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 DDX56Q9NY93 547 aaKnown RBP17.06■□□□□ 0.32
NUP50-218ENST00000493456 FKBPLQ9UIM3 349 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 CRLS1Q9UJA2 301 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 CDYLQ9Y232 598 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 LUC7L2Q9Y383 392 aaKnown RBP17.06■□□□□ 0.32
NUP50-218ENST00000493456 CSAG2Q9Y5P2 127 aa17.06■□□□□ 0.32
NUP50-218ENST00000493456 PRSS44E7EML9 344 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 CNOT3O75175 753 aaKnown RBP17.05■□□□□ 0.32
NUP50-218ENST00000493456 MBD3O95983 291 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 STSP08842 583 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 TMEM253P0C7T8 217 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 ATP1B2P14415 290 aaPredicted RBP17.05■□□□□ 0.32
NUP50-218ENST00000493456 RPA4Q13156 261 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 BOP1Q14137 746 aaKnown RBP17.05■□□□□ 0.32
NUP50-218ENST00000493456 TFDP2Q14188 446 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 PTPRCAPQ14761 206 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 ZNF169Q14929 603 aaPredicted RBP17.05■□□□□ 0.32
NUP50-218ENST00000493456 SLC18A3Q16572 532 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 HIF1AQ16665 826 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 DEFB110Q30KQ9 67 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 NKAIN1Q4KMZ8 207 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 AGAP7PQ5VUJ5 663 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 IRAK1BP1Q5VVH5 260 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 PRAMEF13Q5VWM6 474 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 FCRL6Q6DN72 434 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 PID1Q7Z2X4 250 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 ZNF567Q8N184 647 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 OR4K2Q8NGD2 314 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 DNAJB14Q8TBM8 379 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 CPLX3Q8WVH0 158 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 RNF25Q96BH1 459 aaPredicted RBP17.05■□□□□ 0.32
NUP50-218ENST00000493456 AGAP4Q96P64 663 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 COPS8Q99627 209 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 HGH1Q9BTY7 390 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 FAM60AQ9NP50 221 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 DHCR7Q9UBM7 475 aaKnown RBP17.05■□□□□ 0.32
NUP50-218ENST00000493456 NUP210LQ5VU65 1888 aa17.05■□□□□ 0.32
NUP50-218ENST00000493456 C5orf60A6NFR6 353 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 MASP2O00187 686 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 MMP11P24347 488 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 GABRA4P48169 554 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 CDC16Q13042 620 aa17.04■□□□□ 0.32
NUP50-218ENST00000493456 ZNF658BQ4V348 819 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms