RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CPXM2Q8N436 756 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 MAGEC3Q8TD91 643 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 TBCKQ8TEA7 893 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 AFAP1L1Q8TED9 768 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 LRRC15Q8TF66 581 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 THAP4Q8WY91 577 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 ZC3HAV1LQ96H79 300 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 RBM4Q9BWF3 364 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 IFIH1Q9BYX4 1025 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 BARHL1Q9BZE3 327 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 MINDY3Q9H8M7 445 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 C17orf75Q9HAS0 396 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 SLC28A3Q9HAS3 691 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 KLHL1Q9NR64 748 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 DDX43Q9NXZ2 648 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 C1RLQ9NZP8 487 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 TAAR2Q9P1P5 351 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 THEGQ9P2T0 379 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 GRHPRQ9UBQ7 328 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 BARX2Q9UMQ3 279 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 IGSF9BQ9UPX0 1349 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 SDK1Q7Z5N4 2213 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PLXNA2O75051 1894 aa3.09□□□□□ -1.92
PTCD3-218ENST00000493430 LRRK1Q38SD2 2015 aa3.09□□□□□ -1.92
PTCD3-218ENST00000493430 IGKV3D-15A0A087WSY6 115 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 A0A0U1RQF3 1178 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 A0A1B0GU03 582 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 C17orf113A0A1B0GUU1 675 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 SERINC4A6NH21 518 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CBY3A6NI87 242 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 HSPB2A8KAH6 182 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CEP104O60308 925 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 FAM155BO75949 473 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CABYRO75952 493 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 C22orf31O95567 290 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 PDGFBP01127 241 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-218ENST00000493430 TK1P04183 234 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 SUPT20HL2P0C7V6 817 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF883P0CG24 379 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 FGF5P12034 268 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CD53P19397 219 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 ITGAXP20702 1163 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 KIF5BP33176 963 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 HTR3AP46098 478 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 BIRC2Q13490 618 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 GPM6BQ13491 265 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 HSPB2Q16082 182 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 LETM2Q2VYF4 491 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 TMEM30BQ3MIR4 351 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 EPC2Q52LR7 807 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CLLU1OSQ5K130 101 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 PLPP4Q5VZY2 271 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 JMJD6Q6NYC1 403 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-218ENST00000493430 C1orf228Q6PIY5 440 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 B3GNT6Q6ZMB0 384 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 RPAINQ86UA6 219 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 METTL13Q8N6R0 699 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CNOT9Q92600 299 aaKnown RBP3.08□□□□□ -1.92
PTCD3-218ENST00000493430 TMEM143Q96AN5 459 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF501Q96CX3 271 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CPB2Q96IY4 423 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 IWS1Q96ST2 819 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 PLIN2Q99541 437 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 KIFC3Q9BVG8 833 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 APOL6Q9BWW8 343 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 AGXT2Q9BYV1 514 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 PCDH9Q9HC56 1237 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 ZNF302Q9NR11 478 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 SMYD2Q9NRG4 433 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 PDRG1Q9NUG6 133 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 BARHL2Q9NY43 387 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 CISD1Q9NZ45 108 aaKnown RBP3.08□□□□□ -1.92
PTCD3-218ENST00000493430 DNAJB4Q9UDY4 337 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 PADI3Q9ULW8 664 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 Q9Y3F1 56 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 HES2Q9Y543 173 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 TRPV2Q9Y5S1 764 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 PSAT1Q9Y617 370 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 A3GALT2U3KPV4 340 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 SHROOM3Q8TF72 1996 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 ADGRA3Q8IWK6 1321 aa3.08□□□□□ -1.92
PTCD3-218ENST00000493430 MYLKQ15746 1914 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 HIDE1A8MVS5 230 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 AKR1B15C9JRZ8 316 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 I3L4J1 428 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 B4GALT5O43286 388 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 HLA-DOBP13765 273 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 SLC2A4P14672 509 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 HOXC13P31276 330 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 CA8P35219 290 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 NR0B1P51843 470 aaKnown RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 NLRP11P59045 1033 aaKnown RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 PITX1P78337 314 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 BTG3Q14201 252 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-218ENST00000493430 MAP9Q49MG5 647 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 CEP55Q53EZ4 464 aa3.07□□□□□ -1.92
PTCD3-218ENST00000493430 KCNT1Q5JUK3 1230 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms