RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 GIMAP2Q9UG22 337 aa8.94□□□□□ -0.98
SMARCC1-208ENST00000492896 PRPF19Q9UMS4 504 aaKnown RBP8.94□□□□□ -0.98
SMARCC1-208ENST00000492896 ST14Q9Y5Y6 855 aa8.94□□□□□ -0.98
SMARCC1-208ENST00000492896 PIAS3Q9Y6X2 628 aa8.94□□□□□ -0.98
SMARCC1-208ENST00000492896 GRXCR2A6NFK2 248 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 IGLON5A6NGN9 336 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 BBIP1A8MTZ0 92 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 H3BM21 787 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 H3BQ06 376 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 PEX11AO75192 247 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 KLF8O95600 359 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 LMNAP02545 664 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 DNTTP04053 509 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 SNRPB2P08579 225 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 IDO1P14902 403 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ZNF8P17098 575 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 DRD1P21728 446 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 GPX3P22352 226 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 TEAD1P28347 426 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 BDKRB1P46663 353 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 MRPL19P49406 292 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ACADVLP49748 655 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ERVK-8P63133 956 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 MRPS21P82921 87 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 CDK3Q00526 305 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 PLOD1Q02809 727 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 TBL3Q12788 808 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 GRSF1Q12849 480 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ABRQ12979 859 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 STX5Q13190 355 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 SMAD4Q13485 552 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ART3Q13508 389 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 KPNB1Q14974 876 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 AGERQ15109 404 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 NR6A1Q15406 480 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 WSCD2Q2TBF2 565 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 MMEL1Q495T6 779 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 GGTA1PQ4G0N0 100 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ZNF658BQ4V348 819 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ATP6AP1LQ52LC2 224 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 C2orf27AQ580R0 203 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 TMEM196Q5HYL7 178 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 REP15Q6BDI9 236 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 KIAA1161Q6NSJ0 714 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 KIAA1211LQ6NV74 962 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 PNCKQ6P2M8 343 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 CRTC3Q6UUV7 619 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 IL27RAQ6UWB1 636 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 SCIMPQ6UWF3 145 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 BNC2Q6ZN30 1099 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 NET1Q7Z628 596 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 DSELQ8IZU8 1212 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 PGAM4Q8N0Y7 254 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 CFAP61Q8NHU2 1237 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 HMGCLL1Q8TB92 370 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 ATL1Q8WXF7 558 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 CLPTM1LQ96KA5 538 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 MAGEB10Q96LZ2 347 aaPredicted RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 SLC25A23Q9BV35 468 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 NTMT1Q9BV86 223 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 EFCAB1Q9HAE3 211 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 DNAJC11Q9NVH1 559 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 AIG1Q9NVV5 245 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 CCDC167Q9P0B6 97 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 SERGEFQ9UGK8 458 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 GPR34Q9UPC5 381 aa8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.93□□□□□ -0.98
SMARCC1-208ENST00000492896 MYO10Q9HD67 2058 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 A0A088AWK7 358 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 C17orf113A0A1B0GUU1 675 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 LOC730098B7Z3J9 87 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 SLC28A1O00337 649 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 NR5A2O00482 541 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 MRASO14807 208 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 RGS14O43566 566 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 PLRG1O43660 514 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 ADAM23O75077 832 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 POP7O75817 140 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 PDE5AO76074 875 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 CLDN9O95484 217 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 KRT6AP02538 564 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 KRT6BP04259 564 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 CD1EP15812 388 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 COL9A1P20849 921 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 CCND1P24385 295 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 KRT6CP48668 564 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 RPS21P63220 83 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 IRF4Q15306 451 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 RPS6KA2Q15349 733 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 PTCHD3Q3KNS1 767 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 PLA2G4EQ3MJ16 856 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 LRIT3Q3SXY7 679 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 PDCD4Q53EL6 469 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 C1orf146Q5VVC0 180 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 DOK6Q6PKX4 331 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 PAOXQ6QHF9 649 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 LRRTM4Q86VH4 590 aa8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 MYLK4Q86YV6 388 aaPredicted RBP8.92□□□□□ -0.98
SMARCC1-208ENST00000492896 KLHDC8AQ8IYD2 350 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms