RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 AARSD1Q9BTE6 412 aaKnown RBP19■□□□□ 0.63
SNAPC3-206ENST00000490969 THUMPD3Q9BV44 507 aaKnown RBP19■□□□□ 0.63
SNAPC3-206ENST00000490969 DERL2Q9GZP9 239 aa19■□□□□ 0.63
SNAPC3-206ENST00000490969 NACA2Q9H009 215 aa19■□□□□ 0.63
SNAPC3-206ENST00000490969 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19■□□□□ 0.63
SNAPC3-206ENST00000490969 GALPQ9UBC7 116 aa19■□□□□ 0.63
SNAPC3-206ENST00000490969 AREL1O15033 823 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 RGS10O43665 173 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 TGFBR2P37173 567 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 DSC2Q02487 901 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 MVKQ03426 396 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 PTPRCAPQ14761 206 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 PLEKHG6Q3KR16 790 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 AFMIDQ63HM1 303 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 MRNIPQ6NTE8 343 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CYP20A1Q6UW02 462 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 HIPK1Q86Z02 1210 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 SLC22A15Q8IZD6 547 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CDYL2Q8N8U2 506 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 ATL1Q8WXF7 558 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 LPPQ93052 612 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 C1QTNF3Q9BXJ4 246 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CLDN24A6NM45 220 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CDC7O00311 574 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CXCR6O00574 342 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 STX16O14662 325 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 OR4F21O95013 312 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 PEX11BO96011 259 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 MAGP20916 626 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 IGFBP5P24593 272 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 ARPC4P59998 168 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CXCR4P61073 352 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 NKX3-2P78367 333 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 SIM2Q14190 667 aaPredicted RBP18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CES5AQ6NT32 575 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 GPRIN3Q6ZVF9 776 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 CCDC103Q8IW40 242 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 ZNF540Q8NDQ6 660 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 FCRL2Q96LA5 508 aaPredicted RBP18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 MIR1-1HGQ9H1L0 117 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 EPS8L2Q9H6S3 715 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 SYTL2Q9HCH5 934 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 MPP6Q9NZW5 540 aa18.99■□□□□ 0.63
SNAPC3-206ENST00000490969 METTL15A6NJ78 407 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 IDH3BO43837 385 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 CCNKO75909 580 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 MMP2P08253 660 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 CYP4B1P13584 511 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 MSH3P20585 1137 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 THPOP40225 353 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 CYP4F3Q08477 520 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 TRAF3Q13114 568 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 XKR4Q5GH76 650 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 HEATR4Q86WZ0 1026 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 OR56A4Q8NGH8 313 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 FUBP1Q96AE4 644 aaKnown RBP18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 ESAMQ96AP7 390 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 TBCDQ9BTW9 1192 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 RIBC2Q9H4K1 309 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 IKZF5Q9H5V7 419 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 ELOVL7A1L3X0 281 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 FAM172BPA6NC97 362 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 IFRD1O00458 451 aaPredicted RBP18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 SCELO95171 688 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 GTF2E2P29084 291 aaKnown RBP18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 GBX1Q14549 363 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 PON2Q15165 354 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 ARTNQ5T4W7 220 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 LRRC8DQ7L1W4 858 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 DET1Q7L5Y6 550 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 ZNF784Q8NCA9 323 aaPredicted RBP18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 GPR150Q8NGU9 434 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 KLHL5Q96PQ7 755 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 CEP44Q9C0F1 390 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 OR2B2Q9GZK3 357 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 C6orf62Q9GZU0 229 aaPredicted RBP18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 ZBTB20Q9HC78 741 aaPredicted RBP18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 FAM50BQ9Y247 325 aa18.98■□□□□ 0.63
SNAPC3-206ENST00000490969 NPEPPSL1A6NEC2 478 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 PTGESO14684 152 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 ANKRD28O15084 1053 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 RHOBTB1O94844 696 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 MYCP01106 439 aaPredicted RBP18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 KRT8P05787 483 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 CLK1P49759 484 aaKnown RBP18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 RENBPP51606 427 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 TUBA1BP68363 451 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 ACVR1Q04771 509 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 CAPN13Q6MZZ7 669 aaPredicted RBP18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 CCBE1Q6UXH8 406 aaPredicted RBP18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 TUBA1AQ71U36 451 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 CYP4Z1Q86W10 505 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 RTL3Q8N8U3 475 aaKnown RBP18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 OR52E4Q8NGH9 312 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 RAET1EQ8TD07 263 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 PYCR2Q96C36 320 aa18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 EIF3LQ9Y262 564 aaKnown RBP18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 MN1Q10571 1320 aaPredicted RBP18.97■□□□□ 0.63
SNAPC3-206ENST00000490969 LCHNA4D1U4 455 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms