RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 DUX3Q96PT4 197 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 SEPHS2Q99611 448 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 RTP3Q9BQQ7 232 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 WNT5BQ9H1J7 359 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 GOLPH3LQ9H4A5 285 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 EQTNQ9NQ60 294 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 INTS10Q9NVR2 710 aaKnown RBP4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 OSER1Q9NX31 292 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 CLIC5Q9NZA1 410 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 GDE1Q9NZC3 331 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 SLC24A2Q9UI40 661 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 ACAD8Q9UKU7 415 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZHX1Q9UKY1 873 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 TRPV2Q9Y5S1 764 aa4.52□□□□□ -1.69
HMGB1P38-201ENST00000490557 HEPACAM2A8MVW5 462 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 BLOC1S5-TXNDC5H3BN57 136 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 KRT86O43790 486 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 SOCS5O75159 536 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 TRUB2O95900 331 aaKnown RBP4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 OR2T7P0C7T2 308 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 SLC6A6P31641 620 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 TIMP3P35625 211 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 KRT20P35900 424 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 CX3CL1P78423 397 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 KCNJ10P78508 379 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 PNRC1Q12796 327 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 KRT81Q14533 505 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 LETM2Q2VYF4 491 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZC2HC1CQ53FD0 456 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 C9orf152Q5JTZ5 239 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 GRTP1Q5TC63 336 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 C6orf163Q5TEZ5 329 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 OR10S1Q8NGN2 331 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 OR5M8Q8NGP6 311 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 OR1J1Q8NGS3 322 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 CFAP61Q8NHU2 1237 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 SLAMF9Q96A28 289 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 SLC47A1Q96FL8 570 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 ANKEF1Q9NU02 776 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 ADPRHL2Q9NX46 363 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZNF624Q9P2J8 865 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 OSGIN1Q9UJX0 560 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 NME7Q9Y5B8 376 aa4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 TCF20Q9UGU0 1960 aaKnown RBP4.51□□□□□ -1.69
HMGB1P38-201ENST00000490557 GAPDHSO14556 408 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 P4HA2O15460 535 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 LIFP15018 202 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 SNTB1Q13884 538 aaKnown RBP4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZNF628Q5EBL2 1059 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 LINGO4Q6UY18 593 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 CREBRFQ8IUR6 639 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 TEKT4Q8WW24 435 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 FCAMRQ8WWV6 532 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 NR4A3Q92570 626 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZNF524Q96C55 264 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 PGLYRP2Q96PD5 576 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 OLFM1Q99784 485 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 BTBD10Q9BSF8 475 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 VN1R1Q9GZP7 353 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 PELI2Q9HAT8 420 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 SLC52A3Q9NQ40 469 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 HAO2Q9NYQ3 351 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 CRNNQ9UBG3 495 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 IL17BQ9UHF5 180 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 C2CD2Q9Y426 696 aa4.5□□□□□ -1.69
HMGB1P38-201ENST00000490557 RPGRIP1LQ68CZ1 1315 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 TCRBV21S2A2A0A5A6 115 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 ERVV-2B6SEH9 535 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 E9PI62 339 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 DNM1LO00429 736 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 TSHBP01222 138 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 LINGO3P0C6S8 592 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 TCEA1P23193 301 aaKnown RBP4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 CHRNB4P30926 498 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 MTHFRP42898 656 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 TUBB4BP68371 445 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 DMPKQ09013 629 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 IL11RAQ14626 422 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 CCDC184Q52MB2 194 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 RNASEH2BQ5TBB1 312 aaKnown RBP4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 SLC30A6Q6NXT4 461 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 C16orf54Q6UWD8 224 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 SH2D5Q6ZV89 423 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 CAMKMTQ7Z624 323 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 KCTD6Q8NC69 237 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 SECISBP2LQ93073 1101 aaKnown RBP4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 SPDL1Q96EA4 605 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 PIH1D3Q9NQM4 214 aaKnown RBP4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 NKIRAS2Q9NYR9 191 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 ANAPC2Q9UJX6 822 aa4.49□□□□□ -1.69
HMGB1P38-201ENST00000490557 TRBC2A0A5B9 178 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 PIGNO95427 931 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 PLA2G4BP0C869 781 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 CSE1LP55060 971 aaKnown RBP4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 LGALS3BPQ08380 585 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 AIMP1Q12904 312 aaKnown RBP4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 ALCAMQ13740 583 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 ZNF876PQ49A33 203 aa4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 FAM133BQ5BKY9 247 aaKnown RBP4.48□□□□□ -1.69
HMGB1P38-201ENST00000490557 ELFN2Q5R3F8 820 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms