RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GBP5Q96PP8 586 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 SPRTNQ9H040 489 aaPredicted RBP13.5□□□□□ -0.25
VARS-227ENST00000489979 TFB2MQ9H5Q4 396 aaKnown RBP13.5□□□□□ -0.25
VARS-227ENST00000489979 XKR8Q9H6D3 395 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 ASB8Q9H765 288 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 FAM60AQ9NP50 221 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 IGSF5Q9NSI5 407 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 ACTR10Q9NZ32 417 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 SAE1Q9UBE0 346 aaPredicted RBP13.5□□□□□ -0.25
VARS-227ENST00000489979 CDYLQ9Y232 598 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 ARL5AQ9Y689 179 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 AP1M2Q9Y6Q5 423 aa13.5□□□□□ -0.25
VARS-227ENST00000489979 CCDC66A2RUB6 948 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 PRSS44E7EML9 344 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 H3BMH7 237 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 HCRTR1O43613 425 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 OR2B3O76000 313 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 SRP72O76094 671 aaKnown RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 UMODP07911 640 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 CD63P08962 238 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 GRNP28799 593 aaKnown RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 PRLHRP49683 370 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 AIMP2Q13155 320 aaKnown RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 MRPL14Q6P1L8 145 aaKnown RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 SARM1Q6SZW1 724 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 TRIM73Q86UV7 250 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 AMIGO1Q86WK6 493 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 MCEMP1Q8IX19 187 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 ADGRF3Q8IZF5 1079 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 C19orf47Q8N9M1 422 aaKnown RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 PHC3Q8NDX5 983 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 OR4K2Q8NGD2 314 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 PROKR1Q8TCW9 393 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 GRHL3Q8TE85 626 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 PPP4R1Q8TF05 950 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 TFB1MQ8WVM0 346 aaKnown RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 DCUN1D1Q96GG9 259 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 FCRL5Q96RD9 977 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 AP1M1Q9BXS5 423 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 OR52A5Q9H2C5 316 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 KLHL8Q9P2G9 620 aaPredicted RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 DHCR7Q9UBM7 475 aaKnown RBP13.49□□□□□ -0.25
VARS-227ENST00000489979 FKBPLQ9UIM3 349 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 MYO7BQ6PIF6 2116 aa13.49□□□□□ -0.25
VARS-227ENST00000489979 SNRNP200O75643 2136 aaKnown RBP13.48□□□□□ -0.25
VARS-227ENST00000489979 AGPSO00116 658 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 IFRD1O00458 451 aaPredicted RBP13.48□□□□□ -0.25
VARS-227ENST00000489979 ALOX12BO75342 701 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 CTSBP07858 339 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 RALBP11234 206 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 EDN3P14138 238 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 PBX1P40424 430 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 PRKG2Q13237 762 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 MPP3Q13368 585 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 ZIC1Q15915 447 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 ODF2Q5BJF6 829 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 SPESP1Q6UW49 350 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 MFSD7Q6UXD7 560 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
VARS-227ENST00000489979 HOOK3Q86VS8 718 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 ZNF567Q8N184 647 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 ZNF655Q8N720 491 aaPredicted RBP13.48□□□□□ -0.25
VARS-227ENST00000489979 DNAJB14Q8TBM8 379 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 HGH1Q9BTY7 390 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 MVB12BQ9H7P6 319 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 COG4Q9H9E3 785 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 CRLS1Q9UJA2 301 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
VARS-227ENST00000489979 AKAP9Q99996 3911 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 PDZD2O15018 2839 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 C17orf113A0A1B0GUU1 675 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 ZSCAN9O15535 394 aaPredicted RBP13.47□□□□□ -0.25
VARS-227ENST00000489979 AGTP01019 485 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 TNNT1P13805 278 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 PECAM1P16284 738 aaPredicted RBP13.47□□□□□ -0.25
VARS-227ENST00000489979 PDHA2P29803 388 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 TSFMP43897 325 aaKnown RBP13.47□□□□□ -0.25
VARS-227ENST00000489979 GABRA4P48169 554 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 NR2C2P49116 596 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 XIAPP98170 497 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 CDC16Q13042 620 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
VARS-227ENST00000489979 NKAIN1Q4KMZ8 207 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 PID1Q7Z2X4 250 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 FJX1Q86VR8 437 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 FAR1Q8WVX9 515 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.47□□□□□ -0.25
VARS-227ENST00000489979 CNDP1Q96KN2 507 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 FSD1LQ9BXM9 530 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 FAM96AQ9H5X1 160 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 RUBCNLQ9H714 662 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 SLC6A20Q9NP91 592 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 TXLNGQ9NUQ3 528 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 FBXL4Q9UKA2 621 aa13.47□□□□□ -0.25
VARS-227ENST00000489979 LUC7L2Q9Y383 392 aaKnown RBP13.47□□□□□ -0.25
VARS-227ENST00000489979 C2orf81A6NN90 581 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 KRT38O76015 456 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 STSP08842 583 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 TMEM253P0C7T8 217 aa13.46□□□□□ -0.25
VARS-227ENST00000489979 ATP1B2P14415 290 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms