RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FAM57BQ71RH2 274 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 MTSS1LQ765P7 747 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 PRSS45Q7RTY3 260 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 TRAPPC11Q7Z392 1133 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ARMC9Q7Z3E5 817 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 SPATA21Q7Z572 469 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CUZD1Q86UP6 607 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CEP57Q86XR8 500 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 RNF168Q8IYW5 571 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 PELI3Q8N2H9 469 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 FBXO39Q8N4B4 442 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ENDOVQ8N8Q3 282 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 MIGA1Q8NAN2 632 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 OR52L2PQ8NGH6 319 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 OR2T34Q8NGX1 318 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 HEXDCQ8WVB3 486 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 EXT2Q93063 718 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 WBP2Q969T9 261 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 MIB2Q96AX9 1013 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 C16orf58Q96GQ5 468 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 C5orf30Q96GV9 206 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ERO1AQ96HE7 468 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ADAD1Q96M93 576 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CTAGE1Q96RT6 745 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 TCHPQ9BT92 498 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 GATA5Q9BWX5 397 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 DNAJC17Q9NVM6 304 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ARL15Q9NXU5 204 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 EXTL2Q9UBQ6 330 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 CLIP2Q9UDT6 1046 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC25A13Q9UJS0 675 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 RNF150Q9ULK6 438 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 TNFSF13BQ9Y275 285 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF142P52746 1687 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ZC3H13Q5T200 1668 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 SLIT1O75093 1534 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 KANK1Q14678 1352 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 STRCP1A6NGW2 1772 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 MED14O60244 1454 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 RPRD2Q5VT52 1461 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 NLRP1Q9C000 1473 aa3.13□□□□□ -1.91
DEPDC1-204ENST00000489862 ADAMTS13Q76LX8 1427 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 IGLV5-39A0A0G2JS06 123 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 A0A1W2PPC1 479 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CLRN2A0PK11 232 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 OOEPA6NGQ2 149 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 C5orf52A6NGY3 159 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF814B7Z6K7 855 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 PRYO14603 147 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC30A4O14863 429 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 TTI1O43156 1089 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 NDUFS3O75489 264 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 RSL1D1O76021 490 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 DDHD2O94830 711 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 AK1P00568 194 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 TFP02787 698 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 C8orf89P0DMQ9 161 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 FCGR2AP12318 317 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 SKILP12757 684 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CTPS1P17812 591 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 KCNA5P22460 613 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 SFNP31947 248 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CTNNB1P35222 781 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 MDH1P40925 334 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 PSMC4P43686 418 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 GABRB2P47870 512 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 FASLGP48023 281 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CXCR3P49682 368 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 MXI1P50539 228 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 DGKQP52824 942 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 GBX2P52951 348 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 PRKCZQ05513 592 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 ACSM2AQ08AH3 577 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 RAPSNQ13702 412 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 C15orf59Q2T9L4 293 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CFAP221Q4G0U5 840 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 MANEAQ5SRI9 462 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 ACSM2BQ68CK6 577 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 OR6B2Q6IFH4 312 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC39A5Q6ZMH5 540 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 WDR88Q6ZMY6 472 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 C15orf52Q6ZUT6 534 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 ABI3BPQ7Z7G0 1075 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 ADAMTSL2Q86TH1 951 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 LDB1Q86U70 411 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 TRIM74Q86UV6 250 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 TRIM73Q86UV7 250 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CCDC83Q8IWF9 413 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CDH26Q8IXH8 852 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC35F3Q8IY50 421 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 CADM3Q8N126 398 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 TMEM217Q8N7C4 229 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 OR6C4Q8NGE1 309 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 OR52M1Q8NGK5 317 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 OR10S1Q8NGN2 331 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 RASSF8Q8NHQ8 419 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 MPLKIPQ8TAP9 179 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 BCAS4Q8TDM0 211 aa3.12□□□□□ -1.91
DEPDC1-204ENST00000489862 FAM216AQ8WUB2 273 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms