RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 NHEJ1Q9H9Q4 299 aaPredicted RBP10.07□□□□□ -0.8
CHKB-211ENST00000489453 TXLNGQ9NUQ3 528 aa10.07□□□□□ -0.8
CHKB-211ENST00000489453 ACTR10Q9NZ32 417 aa10.07□□□□□ -0.8
CHKB-211ENST00000489453 IFT80Q9P2H3 777 aaPredicted RBP10.07□□□□□ -0.8
CHKB-211ENST00000489453 SLC5A6Q9Y289 635 aa10.07□□□□□ -0.8
CHKB-211ENST00000489453 B3GNT3Q9Y2A9 372 aa10.07□□□□□ -0.8
CHKB-211ENST00000489453 AAR2Q9Y312 384 aaKnown RBP10.07□□□□□ -0.8
CHKB-211ENST00000489453 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHKB-211ENST00000489453 PTRH2Q9Y3E5 179 aaKnown RBP10.07□□□□□ -0.8
CHKB-211ENST00000489453 AP1M2Q9Y6Q5 423 aa10.07□□□□□ -0.8
CHKB-211ENST00000489453 CENPEQ02224 2701 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 hCG_1818297A0A087WSY0 165 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 C17orf113A0A1B0GUU1 675 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 ANKUB1A6NFN9 424 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 BTN3A3O00478 584 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 OR2B3O76000 313 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 IPO13O94829 963 aaKnown RBP10.06□□□□□ -0.8
CHKB-211ENST00000489453 ZRANB2O95218 330 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHKB-211ENST00000489453 CAPN1P07384 714 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 CTNNA2P26232 953 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 PRKG2Q13237 762 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 SSPNQ14714 243 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 TAZQ16635 292 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 CYP2A13Q16696 494 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 ZRANB3Q5FWF4 1079 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 ZNF789Q5FWF6 425 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 C1orf189Q5VU69 101 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 SPESP1Q6UW49 350 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 TAS2R42Q7RTR8 314 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 SNX20Q7Z614 316 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 RCOR2Q8IZ40 523 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 ZADH2Q8N4Q0 377 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 C19orf47Q8N9M1 422 aaKnown RBP10.06□□□□□ -0.8
CHKB-211ENST00000489453 PHC3Q8NDX5 983 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 OR52E1Q8NGJ3 308 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 OR13C4Q8NGS5 318 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHKB-211ENST00000489453 SNRNP40Q96DI7 357 aaKnown RBP10.06□□□□□ -0.8
CHKB-211ENST00000489453 C19orf60Q96EN9 201 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 PPP1R2P1Q96PQ5 205 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 TRAPPC9Q96Q05 1148 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 CHP1Q99653 195 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 TFB2MQ9H5Q4 396 aaKnown RBP10.06□□□□□ -0.8
CHKB-211ENST00000489453 XKR8Q9H6D3 395 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 ABHD10Q9NUJ1 306 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 ASF1BQ9NVP2 202 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 INTUQ9ULD6 942 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 CNTRLQ7Z7A1 2325 aa10.06□□□□□ -0.8
CHKB-211ENST00000489453 CRYBG3Q68DQ2 2970 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 DOPEY1Q5JWR5 2465 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 PCSK5Q92824 1860 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 ITPR2Q14571 2701 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 KDM1AO60341 852 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 COL8A1P27658 744 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 PSMB4P28070 264 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 RBL1P28749 1068 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 MC4RP32245 332 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 SHMT2P34897 504 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 DCTP40126 519 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 GLRBP48167 497 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 CD151P48509 253 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 DCDP81605 110 aaKnown RBP10.05□□□□□ -0.8
CHKB-211ENST00000489453 RPA4Q13156 261 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 MYBPC3Q14896 1274 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 SLC9A5Q14940 896 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 DEFB110Q30KQ9 67 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 PLEKHN1Q494U1 663 aaPredicted RBP10.05□□□□□ -0.8
CHKB-211ENST00000489453 SYTL3Q4VX76 610 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 DCAF10Q5QP82 559 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 IRAK1BP1Q5VVH5 260 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 CDHR3Q6ZTQ4 885 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 TRIM73Q86UV7 250 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 CDKL3Q8IVW4 592 aaPredicted RBP10.05□□□□□ -0.8
CHKB-211ENST00000489453 KATNAL2Q8IYT4 538 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 GALNT16Q8N428 558 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 TTC13Q8NBP0 860 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 PROKR1Q8TCW9 393 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 TFGQ92734 400 aaPredicted RBP10.05□□□□□ -0.8
CHKB-211ENST00000489453 TCTN2Q96GX1 697 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 ALS2CR12Q96Q35 445 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 TBL1YQ9BQ87 522 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 NDC1Q9BTX1 674 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 HEMGNQ9BXL5 484 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 AP1M1Q9BXS5 423 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 OR52A5Q9H2C5 316 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 AGPAT4Q9NRZ5 378 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 ZDHHC3Q9NYG2 299 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 ERRFI1Q9UJM3 462 aaPredicted RBP10.05□□□□□ -0.8
CHKB-211ENST00000489453 SRPK3Q9UPE1 567 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 TDRKHQ9Y2W6 561 aaKnown RBP10.05□□□□□ -0.8
CHKB-211ENST00000489453 ALG6Q9Y672 507 aa10.05□□□□□ -0.8
CHKB-211ENST00000489453 COPG1Q9Y678 874 aaKnown RBP10.05□□□□□ -0.8
CHKB-211ENST00000489453 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
CHKB-211ENST00000489453 CCL22O00626 93 aa10.04□□□□□ -0.8
CHKB-211ENST00000489453 ZSCAN9O15535 394 aaPredicted RBP10.04□□□□□ -0.8
CHKB-211ENST00000489453 KCNN4O15554 427 aa10.04□□□□□ -0.8
CHKB-211ENST00000489453 SGTAO43765 313 aa10.04□□□□□ -0.8
CHKB-211ENST00000489453 CBX6O95503 412 aa10.04□□□□□ -0.8
CHKB-211ENST00000489453 CLDN1O95832 211 aa10.04□□□□□ -0.8
CHKB-211ENST00000489453 LDLRP01130 860 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms