RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PDCL3Q9H2J4 239 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 RMI1Q9H9A7 625 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 NLRC4Q9NPP4 1024 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 AGPAT3Q9NRZ7 376 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 ZNF701Q9NV72 531 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 GNPTGQ9UJJ9 305 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 CDC23Q9UJX2 597 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 ING1Q9UK53 422 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 VANGL2Q9ULK5 521 aa7.19□□□□□ -1.26
EXOSC3-206ENST00000489414 A0A1B0GTH9 108 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 TSPAN11A1L157 253 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 MAPK13O15264 365 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 TTI1O43156 1089 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 GPRIN2O60269 458 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 VNN1O95497 513 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 ASS1P00966 412 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 XRCC1P18887 633 aaPredicted RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 CYP2A7P20853 494 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 HOXD13P35453 343 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 MAGEA1P43355 309 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 GCGRP47871 477 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 SNRPD1P62314 119 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 COL10A1Q03692 680 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 CKAP4Q07065 602 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 KLHL30Q0D2K2 578 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 AUHQ13825 339 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 SNRNP35Q16560 246 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 IFI16Q16666 785 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 WHAMMP3Q1A5X7 153 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 CCDC70Q6NSX1 233 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 ERAP2Q6P179 960 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 DOK6Q6PKX4 331 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 SHISA2Q6UWI4 295 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 IL17RELQ6ZVW7 336 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 INTS8Q75QN2 995 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 C12orf56Q8IXR9 622 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 SLC35F6Q8N357 371 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 SIRT6Q8N6T7 355 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 ATP6V0D2Q8N8Y2 350 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 TRIM58Q8NG06 486 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 OR7D4Q8NG98 312 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 OR11G2Q8NGC1 345 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 OR10Q1Q8NGQ4 319 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 OR1L3Q8NH93 324 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 LINC01560Q8TB33 94 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 IRGQQ8WZA9 623 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 GCDHQ92947 438 aaPredicted RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 RNASE6Q93091 150 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 CRACR2AQ9BSW2 395 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 ZNF747Q9BV97 191 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 CARD6Q9BX69 1037 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 FN3KRPQ9HA64 309 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 AIPL1Q9NZN9 384 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 PCDHA13Q9Y5I0 950 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 MRFAP1Q9Y605 127 aa7.18□□□□□ -1.26
EXOSC3-206ENST00000489414 CTAGE15A4D2H0 777 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 PIN1P1O15428 100 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 P4HA2O15460 535 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 VEGFDO43915 354 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ONECUT2O95948 504 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 IGLV3-25P01717 112 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 TUBBP07437 444 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CTAGE8P0CG41 777 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CBSLP0DN79 551 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 UCHL3P15374 230 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 FERP16591 822 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 IGFBP5P24593 272 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CBSP35520 551 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ARHGAP25P42331 645 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 FMO5P49326 533 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CASP4P49662 377 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 NAP1L1P55209 391 aaKnown RBP7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CASP9P55211 416 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ATP5J2P56134 94 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CYP24A1Q07973 514 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 EIF4EBP2Q13542 120 aaPredicted RBP7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 FBXL19-AS1Q494R0 122 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ALFQ53S48 1182 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 RNFT1Q5M7Z0 435 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 TEX35Q5T0J7 233 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ATXN7L2Q5T6C5 722 aaPredicted RBP7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 KLHDC7AQ5VTJ3 777 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ARHGAP17Q68EM7 881 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 SEZ6L2Q6UXD5 910 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 LIPIQ6XZB0 460 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 C20orf204Q6ZNR8 217 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 OTOAQ7RTW8 1153 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ADGRG6Q86SQ4 1221 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CTAGE6Q86UF2 777 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 GALNT13Q8IUC8 556 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CTAGE4Q8IX94 777 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 XXYLT1Q8NBI6 393 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 OR5M3Q8NGP4 307 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 CCDC110Q8TBZ0 833 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 HCAR2Q8TDS4 363 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 ARHGEF2Q92974 986 aaKnown RBP7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 SLC35C1Q96A29 364 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 GANQ9H2C0 597 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 FANCEQ9HB96 536 aa7.17□□□□□ -1.26
EXOSC3-206ENST00000489414 KIAA1586Q9HCI6 787 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms