RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 COLEC12Q5KU26 742 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 FBXO42Q6P3S6 717 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 FAM92BQ6ZTR7 304 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 KCNC2Q96PR1 638 aa17.33■□□□□ 0.36
NPHP4-209ENST00000489180 FABP12A6NFH5 140 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 TLL1O43897 1013 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 KERAO60938 352 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 GPX6P59796 221 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 GET4Q7L5D6 327 aaPredicted RBP17.32■□□□□ 0.36
NPHP4-209ENST00000489180 GHDCQ8N2G8 530 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 ARMC5Q96C12 935 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 TBX5Q99593 518 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 AKTIPQ9H8T0 292 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 ZDHHC2Q9UIJ5 367 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 HLA-DQB2P05538 268 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 IDSP22304 550 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 PPP1R8Q12972 351 aaKnown RBP17.32■□□□□ 0.36
NPHP4-209ENST00000489180 LAPTM5Q13571 262 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 PTGES3Q15185 160 aaKnown RBP17.32■□□□□ 0.36
NPHP4-209ENST00000489180 PAQR3Q6TCH7 311 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 ATCAYQ86WG3 371 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 SLIT3O75094 1523 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 ARPC2O15144 300 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 PLA2G16P53816 162 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 HMGCS1Q01581 520 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 NIPA2Q8N8Q9 360 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 IMPDH1P20839 514 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 TCEA1P23193 301 aaKnown RBP17.32■□□□□ 0.36
NPHP4-209ENST00000489180 MSS51Q4VC12 460 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 PRSS55Q6UWB4 352 aaPredicted RBP17.32■□□□□ 0.36
NPHP4-209ENST00000489180 USP43Q70EL4 1123 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 POF1BQ8WVV4 589 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 HIPK3Q9H422 1215 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 MAN2B2Q9Y2E5 1009 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 NID2Q14112 1375 aa17.32■□□□□ 0.36
NPHP4-209ENST00000489180 PSMD9O00233 223 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 NIPSNAP2O75323 286 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 RASGRP1O95267 797 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 OGNP20774 298 aaKnown RBP17.31■□□□□ 0.36
NPHP4-209ENST00000489180 ALAS2P22557 587 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 PPM1AP35813 382 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 TNFAIP8L3Q5GJ75 292 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 ING5Q8WYH8 240 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 GPATCH1Q9BRR8 931 aaKnown RBP17.31■□□□□ 0.36
NPHP4-209ENST00000489180 DUSP26Q9BV47 211 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 CHIAQ9BZP6 476 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 DEC1Q9P2X7 70 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 BTBD19C9JJ37 291 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 H3BSA7 217 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 CD36P16671 472 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 VARS2Q5ST30 1063 aaKnown RBP17.31■□□□□ 0.36
NPHP4-209ENST00000489180 MSANTD2Q6P1R3 559 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 FUT10Q6P4F1 479 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 PYCR2Q96C36 320 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 ELAC1Q9H777 363 aaKnown RBP17.31■□□□□ 0.36
NPHP4-209ENST00000489180 GNB5O14775 395 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 INHBEP58166 350 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 MC1RQ01726 317 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 TIGD6Q17RP2 521 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 TNFAIP8L1Q8WVP5 186 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 LRRC3Q9BY71 257 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 MATN2O00339 956 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 TBX18O95935 607 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 ZNF12P17014 697 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 S100A1P23297 94 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 NFKB2Q00653 900 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 OR14C36Q8NHC7 312 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 LRRC58Q96CX6 371 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 C8orf48Q96LL4 319 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 ZFP3Q96NJ6 502 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 CPQQ9Y646 472 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 CARNS1A5YM72 827 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 IGFALSP35858 605 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 DNASE1L1P49184 302 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 BNIP3Q12983 259 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 SYT16Q17RD7 645 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 ASB9Q96DX5 294 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 MFSD1Q9H3U5 465 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 SLC2A6Q9UGQ3 507 aa17.31■□□□□ 0.36
NPHP4-209ENST00000489180 A8MT66 165 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 PSKH1P11801 424 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 ERVK-8P63133 956 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 DLG1Q12959 904 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 UBXN11Q5T124 520 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 RPS27LQ71UM5 84 aaKnown RBP17.3■□□□□ 0.36
NPHP4-209ENST00000489180 PIM3Q86V86 326 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 PKP2Q99959 881 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 TFB2MQ9H5Q4 396 aaKnown RBP17.3■□□□□ 0.36
NPHP4-209ENST00000489180 COQ4Q9Y3A0 265 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 SLC22A2O15244 555 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 ZNF432O94892 652 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 VIPP01282 170 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 CDH1P12830 882 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 GALNT13Q8IUC8 556 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 UFD1Q92890 307 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 RFKQ969G6 155 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 ZNF317Q96PQ6 595 aaPredicted RBP17.3■□□□□ 0.36
NPHP4-209ENST00000489180 IGKV6D-41A0A0C4DH26 115 aa17.3■□□□□ 0.36
NPHP4-209ENST00000489180 A0A0G2JN53 185 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms