RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 RPA4Q13156 261 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 BOP1Q14137 746 aaKnown RBP17.85■□□□□ 0.45
HDAC6-231ENST00000488905 NCF4Q15080 339 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 PTCHD3Q3KNS1 767 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 ZRANB3Q5FWF4 1079 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 SERPINA9Q86WD7 417 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 AMIGO1Q86WK6 493 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 FDCSPQ8NFU4 85 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 DPH2Q9BQC3 489 aaPredicted RBP17.85■□□□□ 0.45
HDAC6-231ENST00000488905 SLC7A5P2Q9GIP4 190 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 KLHL25Q9H0H3 589 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 LRRC4CQ9HCJ2 640 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 ACTR10Q9NZ32 417 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 G3BP2Q9UN86 482 aaKnown RBP17.85■□□□□ 0.45
HDAC6-231ENST00000488905 MAP4K5Q9Y4K4 846 aa17.85■□□□□ 0.45
HDAC6-231ENST00000488905 C9J4A7 227 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 DPM1O60762 260 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 ZNF189O75820 626 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-231ENST00000488905 AGFG2O95081 481 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 GSTM1P09488 218 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 RWDD2BP57060 319 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 GSTM4Q03013 218 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 ATP1A4Q13733 1029 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 AADACL2Q6P093 401 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 ZNF449Q6P9G9 518 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 SPESP1Q6UW49 350 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 CDHR3Q6ZTQ4 885 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 ADGRF3Q8IZF5 1079 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 ZBTB2Q8N680 514 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 TMEM102Q8N9M5 508 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-231ENST00000488905 PHC3Q8NDX5 983 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 TFGQ92734 400 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-231ENST00000488905 NUDT9Q9BW91 350 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 XKR8Q9H6D3 395 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 NLE1Q9NVX2 485 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-231ENST00000488905 SERTAD3Q9UJW9 196 aa17.84■□□□□ 0.45
HDAC6-231ENST00000488905 RCCD1A6NED2 376 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 ZNF185O15231 689 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 ZNF749O43361 778 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 TJP3O95049 919 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 RRADP55042 308 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 PRKG2Q13237 762 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 FHL5Q5TD97 284 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 ZNF385CQ66K41 422 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-231ENST00000488905 KCTD11Q693B1 232 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 JMJD6Q6NYC1 403 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-231ENST00000488905 MED25Q71SY5 747 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 TAS2R42Q7RTR8 314 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 RAB43Q86YS6 212 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 HPS6Q86YV9 775 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 CLDN19Q8N6F1 224 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 C19orf47Q8N9M1 422 aaKnown RBP17.83■□□□□ 0.44
HDAC6-231ENST00000488905 ALG3Q92685 438 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 CALR3Q96L12 384 aaKnown RBP17.83■□□□□ 0.44
HDAC6-231ENST00000488905 TRIM5Q9C035 493 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 GPR83Q9NYM4 423 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 ICKQ9UPZ9 632 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 PADI2Q9Y2J8 665 aa17.83■□□□□ 0.44
HDAC6-231ENST00000488905 AP2A2O94973 939 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 HBQ1P09105 142 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 CETN2P41208 172 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 CACNG1Q06432 222 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 POU6F1Q14863 301 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 DBN1Q16643 649 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 PRR30Q53SZ7 412 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-231ENST00000488905 SLC6A19Q695T7 634 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 ARHGEF18Q6ZSZ5 1173 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 TRIM73Q86UV7 250 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 PIANPQ8IYJ0 282 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 GPR135Q8IZ08 494 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 Q8NA96 180 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 GLIS1Q8NBF1 620 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 OR5AR1Q8NGP9 310 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 DHRS4Q9BTZ2 278 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 LRRC40Q9H9A6 602 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 LUZP4Q9P127 313 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 DOPEY1Q5JWR5 2465 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 CRYBG3Q68DQ2 2970 aa17.82■□□□□ 0.44
HDAC6-231ENST00000488905 DOCK10Q96BY6 2186 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 CENPEQ02224 2701 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 SOWAHDA6NJG2 315 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 A6NL46 340 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 LIN7AO14910 233 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-231ENST00000488905 UGT2B7P16662 529 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 AGXTP21549 392 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 SHMT2P34897 504 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 NAP1L1P55209 391 aaKnown RBP17.81■□□□□ 0.44
HDAC6-231ENST00000488905 INPP5JQ15735 1006 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-231ENST00000488905 PARP6Q2NL67 630 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 DEFB110Q30KQ9 67 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 MRGPREQ86SM8 312 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 HOOK3Q86VS8 718 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 STYXQ8WUJ0 223 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 N4BP2L2Q92802 583 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-231ENST00000488905 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDAC6-231ENST00000488905 PNPLA2Q96AD5 504 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 SMAD5Q99717 465 aaKnown RBP17.81■□□□□ 0.44
HDAC6-231ENST00000488905 MFRPQ9BY79 579 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 FAM60AQ9NP50 221 aa17.81■□□□□ 0.44
HDAC6-231ENST00000488905 SLAMF7Q9NQ25 335 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms