RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 PIK3R6Q5UE93 754 aa11.49□□□□□ -0.57
LDLRAP1-207ENST00000488127 C17orf64Q86WR6 236 aa11.49□□□□□ -0.57
LDLRAP1-207ENST00000488127 DPP10Q8N608 796 aa11.49□□□□□ -0.57
LDLRAP1-207ENST00000488127 DCAF4L2Q8NA75 395 aa11.49□□□□□ -0.57
LDLRAP1-207ENST00000488127 CLHC1Q8NHS4 586 aa11.49□□□□□ -0.57
LDLRAP1-207ENST00000488127 RDH11Q8TC12 318 aa11.49□□□□□ -0.57
LDLRAP1-207ENST00000488127 CLP1Q92989 425 aaKnown RBP11.49□□□□□ -0.57
LDLRAP1-207ENST00000488127 CXCR2P25025 360 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 MTHFRP42898 656 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CDH15P55291 814 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 EIF2B5Q13144 721 aaKnown RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 IL18R1Q13478 541 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 SERINC3Q13530 473 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 MED22Q15528 200 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ARL13AQ5H913 290 aaPredicted RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ZDHHC20Q5W0Z9 365 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 RAB43Q86YS6 212 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ZNF599Q96NL3 588 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 SLC2A13Q96QE2 648 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ADAM7Q9H2U9 754 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 DNAJC28Q9NX36 388 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 TMEM216Q9P0N5 145 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 MBD2Q9UBB5 411 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 SAMHD1Q9Y3Z3 626 aaKnown RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 A0A0J9YYE9 177 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CYP11A1P05108 521 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ACP5P13686 325 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ACTR1BP42025 376 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ACTR1AP61163 376 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CSNK2BP67870 215 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 LMAN2Q12907 356 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 SIM2Q14190 667 aaPredicted RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CHRNA6Q15825 494 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 HEXDCQ8WVB3 486 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 LINC00597Q9H2U6 94 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 EPB41L4BQ9H329 900 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 TRPV5Q9NQA5 729 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 TMEM248Q9NWD8 314 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ENTPD4Q9Y227 616 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 G3V2T6 193 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 H0YGN5 161 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 K7ERQ8 282 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 STK16O75716 305 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 RB1P06400 928 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CKMT2P17540 419 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ADSLP30566 484 aaPredicted RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ANXA11P50995 505 aaKnown RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 TMEM25Q86YD3 366 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 AADATQ8N5Z0 425 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 TSSK3Q96PN8 268 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 HOPXQ9BPY8 73 aaPredicted RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 AARSD1Q9BTE6 412 aaKnown RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 DZANK1Q9NVP4 752 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ELOVL2Q9NXB9 296 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 TOR4AQ9NXH8 423 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 TRAF6Q9Y4K3 522 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 NFS1Q9Y697 457 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 GABRDO14764 452 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 FPGTO14772 594 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 PLIN3O60664 434 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CFIP05156 583 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 GLDCP23378 1020 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CDC42P60953 191 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 MSS51Q4VC12 460 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CAPN13Q6MZZ7 669 aaPredicted RBP11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 ENPP7Q6UWV6 458 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 IKBIPQ70UQ0 350 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CUZD1Q86UP6 607 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CLYBLQ8N0X4 340 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CYP4Z2PQ8N1L4 340 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 CNTD1Q8N815 330 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 UBE2E3Q969T4 207 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 FEM1AQ9BSK4 669 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 SP140LQ9H930 580 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 RASSF1Q9NS23 344 aa11.48□□□□□ -0.57
LDLRAP1-207ENST00000488127 NEMP2A6NFY4 417 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 SAGE2PA6NJ88 616 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 UBXN8O00124 270 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 PRAMEF11O60813 436 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 IPO13O94829 963 aaKnown RBP11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 HNRNPA1P09651 372 aaKnown RBP eCLIP11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 NSG1P42857 185 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 KIAA0930Q6ICG6 404 aaPredicted RBP11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 PRR23BQ6ZRT6 265 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 Q6ZVL8 140 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 RERGQ96A58 199 aaPredicted RBP11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 VPS35Q96QK1 796 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 CLSTN3Q9BQT9 956 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 CARS2Q9HA77 564 aaKnown RBP11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 ERGIC3Q9Y282 383 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 AP3M1Q9Y2T2 418 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 CFAP20Q9Y6A4 193 aaKnown RBP11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 TRIOBPQ9H2D6 2365 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 FAM240BA0A1B0GVZ2 78 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 TBX1O43435 398 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 IDH3AP50213 366 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 HLA-DQA1Q5Y7H0 255 aa11.47□□□□□ -0.57
LDLRAP1-207ENST00000488127 NEK5Q6P3R8 708 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms