RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SLC30A9Q6PML9 568 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 FAM83HQ6ZRV2 1179 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 UBE2R2Q712K3 238 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 SLC9B2Q86UD5 537 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 KIRREL3Q8IZU9 778 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 PLD6Q8N2A8 252 aaKnown RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 ZNF548Q8NEK5 533 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 FAM46DQ8NEK8 389 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 OR5K2Q8NHB8 316 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 RAB3IL1Q8TBN0 382 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 LMX1AQ8TE12 382 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 FAM111AQ96PZ2 611 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 LRRC61Q9BV99 259 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 TM7SF3Q9NS93 570 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 POT1Q9NUX5 634 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 INTS9Q9NV88 658 aaKnown RBP10.78□□□□□ -0.68
HDLBP-242ENST00000488013 TMEM216Q9P0N5 145 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 FAM8A1Q9UBU6 413 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 SNX11Q9Y5W9 270 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 R4GN57 208 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 PLXNA2O75051 1894 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 NUMA1Q14980 2115 aa10.78□□□□□ -0.68
HDLBP-242ENST00000488013 A6NCN8 305 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 STX16-NPEPL1H3BU86 382 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 MYO1CO00159 1063 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 STX16O14662 325 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 SCAMP1O15126 338 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 FFAR2O15552 330 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 PCDHGA12O60330 932 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 C1orf105O95561 183 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 PROCP04070 461 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ZNF883P0CG24 379 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 GFAPP14136 432 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 XRCC1P18887 633 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 PDHA2P29803 388 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 SERPINB5P36952 375 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ETV4P43268 484 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 GLRBP48167 497 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 SERPINB4P48594 390 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 PIK3CGP48736 1102 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ALDH18A1P54886 795 aaKnown RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 DLG1Q12959 904 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 TGFBIQ15582 683 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 TSNQ15631 228 aaKnown RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 HLA-BQ31612 363 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ZNF542PQ5EBM4 170 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 SBSNQ6UWP8 590 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ZYG11AQ6WRX3 759 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 CDHR3Q6ZTQ4 885 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 RASGRP3Q8IV61 690 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 VRK3Q8IV63 474 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 TRIM48Q8IWZ4 208 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 SPATA6LQ8N4H0 392 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ARMC2Q8NEN0 867 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 OR6C4Q8NGE1 309 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 DENND1AQ8TEH3 1009 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 NAT14Q8WUY8 206 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 DYDC1Q8WWB3 177 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ATOH1Q92858 354 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 CXorf40BQ96DE9 158 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 C12orf66Q96MD2 445 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ATOH8Q96SQ7 321 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 WWP1Q9H0M0 922 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ARL15Q9NXU5 204 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 FAM53CQ9NYF3 392 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 CD274Q9NZQ7 290 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 SPATA7Q9P0W8 599 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 COPG2Q9UBF2 871 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 TBC1D29Q9UFV1 150 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 KLF15Q9UIH9 416 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 PCDHGB2Q9Y5G2 931 aa10.77□□□□□ -0.69
HDLBP-242ENST00000488013 PCYT1BQ9Y5K3 369 aaPredicted RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 ATXN2Q99700 1313 aaKnown RBP10.77□□□□□ -0.69
HDLBP-242ENST00000488013 FAM221BA6H8Z2 402 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 NPEPPSL1A6NEC2 478 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 FOXO6A8MYZ6 492 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 SUPT3HB4E1H0 165 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 TARM1B6A8C7 271 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 H3BQF6 201 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 CDC7O00311 574 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 YY2O15391 372 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 KLK8O60259 260 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 SUPT3HO75486 399 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 VIPP01282 170 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 LMNAP02545 664 aaKnown RBP10.76□□□□□ -0.69
HDLBP-242ENST00000488013 ZNF806P0C7X5 589 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 DHRS4L1P0CG22 281 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 NEFHP12036 1026 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 CREB1P16220 341 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 CCND1P24385 295 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 GRK2P25098 689 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 AK4P27144 223 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-242ENST00000488013 RPL10P27635 214 aaKnown RBP10.76□□□□□ -0.69
HDLBP-242ENST00000488013 EPHA8P29322 1005 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-242ENST00000488013 OAS2P29728 719 aaKnown RBP10.76□□□□□ -0.69
HDLBP-242ENST00000488013 NBL1P41271 181 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 DNAJB13P59910 316 aa10.76□□□□□ -0.69
HDLBP-242ENST00000488013 TCF15Q12870 199 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms